CI01000306_08378026_08379833


Basic Information

Item Value
gene id CI01000306_08378026_08379833
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 8377980 ~ 8380016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_08378026_08379833.mRNA
GTATATAATAATCTCACACTGTCCGTCTGACACCCTTCACCTCATCATGGCACTACAAATCATCAGCGTGCTTCTTTTCACTGTGTTTTTCTCCAAAGCACTGACACTGATGTGTTACAACTGTACCACAAAAGTTTCACCTGGAACATGCAATCAAACTGCTAACTGTTCTTCAAACTTAGGGTGCAGCTCCATGACCACATACGATGGCAGTGACATTACTTATAATAATAAATGCGCAAATACTACCTTGTGTGATGACTGGAGTATAACTCTTAGACAGATCAGGATGTTCTCCCACTGCTGTGCTTCAGATCTCTGCAACAATGCTACAGCTTCAGACTCAGAGAACGGATTGATGTGTTACACCTGCAATGACATATACTGCTCAAACACCCAAACACTGAAATGTAAAGGTGATGAGAACCAGTGCATCACTGCAGCAGTAAATGTCAGCAATATCATTTCAAAAGGATGCGCAAGCCAAAACTTCTGTAAGAACAGTACACTATGGAGAAATGCACTATTGAGCAGTATAACAGGGAATAGTACACTACCAAACAGTGCACCATTGAACAATTCACAATTCCAACAGCCGTCCGTGTCTTCTGTTTCATGTTGTGGAGCAAACCTGTGTAATAATGCCCCGAGTACGACACAGGAAGCTGTGTTGCTGCTAGTACCAGTCCTTTCCCTCTTTTTTTCCGTCTGAGATCTGTTTTAAGAGGATTTCTTTTGTTTTTTTTTAGTCTGTGGATGCTTGTCTTTGTAAATGCAAAGCAGTTTCGAGGTTTTCTGTTTAATTGAGGGGAATTTATTTGCTTAAAATGACCGTCTGTCTCATAACAAGCATGCTGCAAGCATGTATTTCTAATCATAAATGTAATCATGTAAA

Function

NR:

description
prostate stem cell antigen precursor-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_08378026_08379833.mRNA True 895 mRNA 0.40 5 8377980 8380016

Neighbor

gene id symbol gene type direction distance location
CI01000306_08372816_08373112 NA coding upstream 3858 8372586 ~ 8374122 (+)
CI01000306_08354856_08360499 MON1A coding upstream 17164 8354856 ~ 8360816 (+)
CI01000306_08295667_08298865 FAM212AA coding upstream 79003 8295667 ~ 8298977 (+)
CI01000306_08284059_08286677 GNAT1, GNAI2 coding upstream 90565 8283644 ~ 8287415 (+)
CI01000306_08262998_08279373 NA coding upstream 98260 8262070 ~ 8279720 (+)
CI01000306_08388107_08410565 MST1R, MST1RB coding downstream 7391 8387407 ~ 8411763 (+)
CI01000306_08508559_08518460 CAMKVA, CAMKVB, CAMKV coding downstream 128543 8508559 ~ 8519351 (+)
CI01000306_08571500_08571802 NA coding downstream 190569 8570585 ~ 8572166 (+)
CI01000306_08599141_08604219 NA coding downstream 218969 8598985 ~ 8604309 (+)
CI01000306_08866470_08867329 NA coding downstream 486412 8866428 ~ 8867766 (+)
G435186 NA non-coding upstream 160365 8217401 ~ 8217615 (+)
G435184 NA non-coding upstream 218126 8159569 ~ 8159854 (+)
CI01000306_08131828_08140454 NA non-coding upstream 236136 8131533 ~ 8141844 (+)
G435155 NA non-coding upstream 318826 8058947 ~ 8059154 (+)
G435218 NA non-coding downstream 49951 8429967 ~ 8430334 (+)
G435224 NA non-coding downstream 62364 8442380 ~ 8442628 (+)
G435225 NA non-coding downstream 62940 8442956 ~ 8443415 (+)
G435253 NA non-coding downstream 101703 8481719 ~ 8486628 (+)
G435257 NA non-coding downstream 111334 8491350 ~ 8494776 (+)
G434545 NA other upstream 1258121 7119317 ~ 7119859 (+)
G433724 NA other upstream 2248202 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 2269805 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 2391692 5975822 ~ 5986288 (+)
G432958 NA other upstream 2717811 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 845549 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 893883 9263589 ~ 9289035 (+)
G435590 NA other downstream 1332833 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 1480197 9860480 ~ 9865724 (+)
G435639 NA other downstream 1499904 9878664 ~ 9884919 (+)

Expression


Co-expression Network