XLOC_003593 (camkvb)


Basic Information

Item Value
gene id XLOC_003593
gene name camkvb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 35364445 ~ 35441348 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007012
AAAAAAATCCCGCCAGCGCGAAACAGATGGGAAGGCATCCGCGGAATTTGCGACCGTTACCGTCCAGTGAATAACCGTCAAAACTTAAcggacaccgacaagaagttgaGCTCGTCCGGAAGACTTCTGGACTGAGAACTTGAGGACATTTCACGCTTGTTCACGACTGGAAAAGGGCAGGTGGGCCATGCCATTCGGCTGTTTAAAACCTGGGGAGAAGAAGGACTACAACAGTCCTACAGAAATCACAGACAAATATGATCTGGGGCAAATTGTTAAATCGGAGGAGTTCTGTGAGATATTCAGGGCGAAAGATAAAAACACACTGAAAATGTACACCTGCAAAAAATTCCTGAAGAAAGATGGAAGAAAGGTGCGGAAGGCTGCCAAAAATGAGATTGTCATCCTAAAGATGGTCAAACACCCCAACATTCTCCAGCTGGTGGATGTATATGAGACCCGGAAAGAGTACTACCTCTTCTTGGAGCTAGCCACAGGTCGGGAGGTGTTCGACTGGATTCTGGATCAAGGCTATTATTCCGAGAGGGACACCAGTAATGTTATCAGACAGGTGATGGAGGCGGTGGCGTACCTGCACAGCCTGAAGATCGTCCACAGGAACCTTAAGCTTGAGAATCTGGTGTACTACAACCGACTGAAACATTCGAAAATAGTCATCAGTGATTTCCATCTGGCAAAACTGGAGAATGGACTCATCAAGGAGCCCTGTGGAACCCCTGAGTATCTGGCCCCAGAGGTTGTTGGAAGACAGAGATATGGTCGACCTGTGGACTGCTGGGCCCTTGGTGTGATCATGTACATACTGCTCTCTGGAAATCCTCCATTTTACGATGAAGCAGATGATGATGACTATGAAAACCATGACAAAAACCTCTTCCGGAAGATTCTTGCTGGAGATTATGAGTTTGACTCACCTTACTGGGATGAAATCTCAGACTCTGCTAAAAACTTAGTGTCACGTCTTATGGAGGTGGACCAGGACCAGAGACTGACTGCACAAGAAGCCATCAACCATGAATGGATATCAGGAAATGCTGCATCAGACAAGAACATCAAAGAAAACGTGTGCGCTCAAATTGAGAAGAATTTCGCCAAAGCAAAGTGGAAGAAAGCGGTGCGGGTCACAACCATGATGAAGCGTCTCCGGGCACCAGAGAATCagacagcagcagcaacagcaccTGCAGCAGAAGCTGCTGCAGCATCTCCCAGTGAAGCCGATCCTGCAGCTGGAGCTCAGGAAACCCCTCAAGCTGCATCAGAGGCCTCCACAGCCCCGTCCAGTACTGCTGAAAGCCTCTCGGCAAGCATAGAAGTCCCTGCCGTGGAACCTGCCAATGCAGAAGCAGCGAGCGCAGCCGTCCAGCCGCCAGCTGAGCCTGTTGTCCACGTCCCAGAGCCCGAACAGCCCGTTCCCACATCACGATGCAACGGAGAGGCTTCAGCTTTGGACACAGTGGAGGAGCAGAGCGGCTAATCTTGCTAACTCTACCACCCTGGGttagacccacacacacacatgtacatatgCAGCAAGCATGCTAATACTGAAGATTCCGCAGCACATAGCATTAAACACGCTCTCTCACGAGCCGACAATTTCCCAGCATACATCTGTTTTCTATTGAATCACAAAGCTGTGACGCAACGGCTCCGGCCACTTTatgtaaaagaagaaaaaaaaagctgttttctgCTTACATTAAGCCGAGATTGGAAACTCTAGCACTGATCTGCGTCCATGTTTTAGGGTAGATTTATCATTTTATAAAGTTACTATTTATTTGCATCGCAGCTCAAGAACCACAGAGAGACAGCTTCAGGCGAAATGTAAAGTTTCTGTAAATAGCTTCCTTACCTCTGTAGATTAGACGTAGCCAAGAACagcatgctttttcagatctgcTGTTTACGACATGTCCGGCTTCAGCTTTACTTTTCATTATCAAACACAAGCTCATGAAGCGTCGGGGATTTACGTGCAAAACACTTCTGCAGCAACTAAAGCGGCTCAATTCATCTTGTAATGGTGTTTTAGTGGTTGAGACATGTGGCCCAATAAACGGAGCAGAGCAGGTATCATTAATACCGCAGATCTGCTTGGTAGCTAGCCACATGGACAGTGGAAACCGTGATCTGTACTTATGTAATATAGACACATTTACATACATTGTACATGTTTTGAAGAAGATACATGtccattttaaaaatacacaaccATATTATTTTGAATAGGATTTCACGAGGCATTAATGAACATGCCTTGTGTTGGGTTAAATATACTCAAAATCGCGATAAATCTACTTAAAAACTTACTTAAATTTACATACTTCCTTTTACgatgaaataaatgtattattgcattAAACAAATAGTCTTGACTCTTGAAAATAAAAGtatgaaaacataaaatatatatttattgtttaagtCAAACaaatctttttctgaattgcaAATGCTTGAcaggaattatatatatatacacacatcgtcatatttattaatatagtgcTTTATATAATACAGATTGTATCAAAGAAATttcattgttaatatttttttctctttagcaaATGTGAATTAGGTCAGATTATAAAACAATCTCCATGAAGTAAAGTGCTGCaggaaagacttttgtttttgcatttttgaatgCCTGAAATAAAGTCTGGTTTGTCCAGGGTCAAATAATTCTGCTTCTTCAACAAGATAGATCTGTTAAGCCTTTACTGGTCTTTAAAAGGTGGCTAACAAGTGGCTGCATCTAACAAACAGAAGTTATTAACAGCGTGTGTATATGCAGTACAGTtaaaacaaaactattagccctacTGTAATTTtgaataggttttttttttaattccaagacatttttaaaattatttttaataactaatttctttagtTTTCATAATGattacagtacataacattttccAAGATACGAGTTTTCAGCTTAGTTAAAAGcctaactagggtaattaggcaagttaggataattaggcaagtcattagacaatagtggtttgttctgtaatcaacttcttttttttaaatatatatttttatttccagcaaaaaaaaaaaaaacaaaacaaacaagacttttttcagaagaaaaatataatagaaaacactgtgaaaaatgttcttgctctgttacacatcacttgggaaatatgtgaataataataaaaacaattcacaGGAGGGATAATATGTTTATCTTACCTTTTTTAATCTTCATCTCTCTCTGTAGAAATGATAGCAGCCGTTGTACAATAACTGAAACAGCCAGTTTACCGACACCAATTAAACAGCACAGCACCGGCTGACATCGCAAGTCATGAGaccaaacagaaaaacaaattatttttcagCTTCTCAATGCTCATGATCACACTATAGTGAAAAGTACACAGTAAAAAGTGATctattttaaagtgagtaaacccattgcctcgAAGGTAGCATCAATTGAATTAACCTTTAtgtctatagcgcttttacaatatagactGTGTGAAAGCagattaacatagaagttctaataaattgagattgtgtcagtccagttttgaaAGTCAggttaattcagttcagttcacagctgaaaatccaaacactgaagggcaaatccatcaatgtgcagctccacatgTCCCAAACCAATCAAGGCTGTGGCCTTCAACAATTGACAAAAGTTAACTCAACTTAGATAGGGAGTAAACCCACTGTAACTTTGAACTGTTAatatcatttattcatgcatttttctttggcttagtctatcaggggtcaccacagcggaatgaaccgccaacttttccggcatatgttttacacggcagattccctcccagctgcaacccagtactgggaaacacctatacactctcacattaacaCCCACTAAGGCCACTTTAGTTCATCGAATTCATTTAtgccgcatgtttttggactgtgagggaaaaccggagcaaacccacgccaacacagggagaacatgcaaactccacacagatatgcccaCTGGCTCAGCCAGAACTTAAACCTGCAACCttttttctgtgaggtgacagtgctaactactgagccaccgtgacaccctaacTGTTAAGTTGATtaacttaattattataattatgcagttcatttacttaaaaatgttATGGAaaagggtttactcactttaagtcaactaatcattttaaaagcaacagctttactcacttattttaagtcaacttttTTGTGTATTCAAACTCACTGACCATAGCGTAGATGATGCTTAGCTTACCTTTTTACTTCTGCCTTTTGCCTGTCTTGTTCTGACTTTTGtagatgtttattattattattattattattttattttttttttattttatttaattttttagagGGAACCAAGATGTAGTAACTTTGACCTACAAAAATCCTCCCTGCAGCACTCTATTGTTTGTGAAcgataaacatttattaatgctaATGAAATCTAGCCCTGTTAATCTGATCATAAACATGAACAATTTTAATTAttagttatattttaatttttaattcaggGACATTTATATTGTCTTGGAGCCAACAAATATTAGGCAGAATAAAGCATTCTaagttgtttttgtgtgtaaatgggaattttttttttgacaacttttttttttaacattgtactGTAAACAAACCCTCATTTTAAAAGTCTCCCATCAGCAAGATTTTGCAATTTTATACAGATTTTTCTCATTCATGCTTCACTAGACACATCTGTAACTCATTCTGCCAGTATTTACTCATTTCAGTTTATGCGTTTTTAAATTTGACAACTAATTTTGTGCTGTCCTAAGTTCAGTACACGAACATGTTTTAGCACAGAAACGGCAGGTGATGTAGGATTAAAAGAGCATATTTATTGAAAGCAAAAGAAACGGTCGACCTCTTAATATGAGCAATAGTCTACAACTGCGATACTGTGATGCTAACGTCAATGTCGGTGTCCGTCTGAGCGCTCAATTTCTGATTGACGTGTCCTACGTTAAAGTTGACAATAGTAATGTTATCCAGGTCAAAACTTAAGCAGGACAGATGAAGCCAGTGCAACTATCGGACAATTATTAACAGCCTGTCACGAACAAGAGCAGTTTCCCCTCCGGTGGCCAATGATCTGTAATTGTTGTGCAGCGGCGACATACTGTAATTTTCCAAACATCATAGGAGTCAGTGGAGGTTTGACTGAAGAAGGCCTTGATCTGCAATTACGCTGTCAGTGGTCTATTGATTTCAAGATGACACACCAcatggattgtgtgtgtgtttgcgtgtgtgtgttctgttACAGGTTTCTATTGTAGTCAGCTTAGATCTCACATGTGTCATTGTCATTTCTTTTCTCTTTACTATTATATTACCTTATGAACCCTATGCCATACCTTGATCTGTTCTATCTTTGAgatgttatttgtttttctgtCACTGATTTCTTACTAAAAGCTTAAACTGGTgagacctaaaataaaaaaaaaacgagtgGTAAACGATGTTTCATGTAGGTCTGAAAGTTTTTCTATAGGATTTGTGTATACTAAAACCGCAACTAGATACTGTGTTACACAACTCAAAGCAATTTTTTTGAAATAGTGCTTCACTATTGCCTTTGGTGTTCGATGTGTGTTGATTTCCACATTCTCTCTGATGTTTTATCTCAGTGTGGTTGACTGTGAACCTGTGAATACACTGAGGACTGGCCTCTCTCCACTTTAACCTCTGTATTCTTCAACTGACTTTCATGCTTTCAGAATAAACACATCCTGAATGATTAAA

Function

symbol description
camkvb Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasmic vesicle membrane. Is expressed in nervous system and neural tube. Orthologous to human CAMKV (CaM kinase like vesicle associated).

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0016020 membrane cellular_component
GO:0030659 cytoplasmic vesicle membrane cellular_component
GO:0005516 calmodulin binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004683 calmodulin-dependent protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1140 Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasmic vesicle membrane. Is expressed in nervous system and neural tube. Orthologous to human CAMKV (CaM kinase like vesicle associated).

Ensembl:

ensembl_id ENSDARG00000005141

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007012 True 5850 mRNA 0.39 11 35364445 35441348

Neighbor

gene id symbol gene type direction distance location
XLOC_003592 NA coding upstream 49211 35298843 ~ 35315234 (+)
XLOC_003591 mst1rb coding upstream 125689 35196587 ~ 35238756 (+)
XLOC_003590 NA coding upstream 169907 35189723 ~ 35194538 (+)
XLOC_003589 mon1a coding upstream 179388 35171406 ~ 35185057 (+)
XLOC_003588 CT963136.1 coding upstream 270723 35093605 ~ 35093722 (+)
XLOC_003594 CR933559.1 coding downstream 611383 36052731 ~ 36146847 (+)
XLOC_003595 grm2b coding downstream 716786 36158134 ~ 36216651 (+)
XLOC_003596 GPR62 coding downstream 789900 36231248 ~ 36237676 (+)
XLOC_003597 zgc:172270 coding downstream 802426 36243774 ~ 36249902 (+)
XLOC_003598 sypl2a coding downstream 914000 36355348 ~ 36376073 (+)
XLOC_003369 CR854846.2 misc upstream 19241363 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 22652449 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 22670182 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 22678846 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 22684417 12679732 ~ 12680028 (+)
XLOC_003583 NA non-coding upstream 803706 34551024 ~ 34560739 (+)
XLOC_003581 NA non-coding upstream 961638 34397567 ~ 34402807 (+)
XLOC_003602 CU928222.1 non-coding downstream 1052746 36494094 ~ 36500806 (+)
XLOC_003603 CU928222.3 non-coding downstream 1064326 36505674 ~ 36515323 (+)
XLOC_003604 CU928222.2 non-coding downstream 1078623 36519971 ~ 36528422 (+)
XLOC_003605 CR457444.5 non-coding downstream 1100203 36541551 ~ 36547269 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_08508559_08518460 CAMKVA, CAMKVB, CAMKV coding CI01000306 null 8508559 ~ 8519351 (+)