XLOC_003596 (GPR62)


Basic Information

Item Value
gene id XLOC_003596
gene name GPR62
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36231248 ~ 36237676 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007017
CAGTGTTGCAGTGTGTTATTGTTGTCTTCTTCGCCTCCTCTGTTAGGGTGAACTGACTCAGTGTAATGAGTGTCTGTGTAATGGACTGACCTGCACATCATGTACATCTGTCAGTGTAATGGTTTCCGCTGCTCTTAAGTGCAAAGACCAAACACAACTCCATCAAGCTCCCTAAAGTGCTGGATAAACTCCACCGATGGACAGATCCGGGATTCGGGAACACTGAAGGATGCTCGACCAGATCTACATGACAGATGTCAGTTGACCTTTAACCGCCAACTGATGTGTCCCCATTCCTGACTGCTAGAAGATGGAGAACCCTACATTTCTGCTTTGTATTTCGcacactacactgtaaacaatggaTGCTTCTGGATTACCTCCAGCAGCAGCAGAGCTCAATGAAACTGAACTTAATGAGACACTGACTCATGGCCACCCCATACATCTGCCTCCCAGCATGCAGTTAGGGAGCATGTCCAACCCGCAGTCACGTTTACGAGACATGTCAGGCCTCGTCGTAATGGTGACCCTTAATGCGATAGCACTAATAGCCAACAGCGCAGTGCTAGCCATAGTGGTGAAAGTGCCACATCTCCGTAAGTTCAGTTTAGTCTGTCACCTTTGCATTGTAGATTTGCTATGTGCCGCTCTGCTAATGCCGCTTGGCATTGTCTGTGGTTCGCCGTTCTTCGCCGGCGTCGTCTTTTCCGTACTCGAATGCAGGTTGTACATATTCCTCAATGCCTTTCTTGTATCTGCCTCAATCTTCACGGTCACTGTGATAAGCATCGAACGCTACTTCTACATCGTGCATCCTATGAGGTACGAGGCTAAAATGACCCCTTGGTTGTCAGCGGCTGTAATGGGACTCGTTTGGGTGGCGTCCACTTTGCTAGGACTCGCGACAGTCTTCGGATGGCCCAGTTATGGAAGTAGAAGCTCAATCGCAGCAACTCACTGCTCCCTCCATTGGAGCCACAGCGGACATAGGAGAGTGTTTGCGATTTTATTCTGCacagtttgtttttgtgtgcCGGCTGCTATTATTATTGCCGTCTATGGGAATGTTTATAAGGTCGCCCACACAGCTGCCCGGGAAAGAGGACCGATCCCGAGTTGGACAATAGCGACGGCTCATCCGAAACGCAGGTCTGATTCGGTCAACAGCCAAACTACAATCATCACCACCAGCACAAGCGTCCGCAGGAATCAAGTCCCTCGTCGGAAAAGGAGAACACTTGTTGGTGGAAAGGCAGCACTTACTTTAGCCATCATCGTGGGTCAGTTCCTGCTCTGCTGGCTGCCTTATTTCGCTTTCCACCTTCATTTATCCCTGGGTATCTCCCATAGTACTTCTGAAGAAGCCGAAGGTCCCGTCACCTGGCTGGCGTATTCGACTTTCGCCGTCAATCCCTTTTTTTACGGCCTGCTCAATCGGCAGATTAGGGAAGAGTTGTGTAAGATATTCCTGTGTTGCCGATCGGCTGGCAGACCAGTGCGACCTTCACCCTCAGGCCACGAACGCTCAGGACATGAAGACTTTTTCCATTTTTTGCACAGGAGAGGTGACAGGGATGGGGTTAGATGCAATTATCACATGGCTACATCGAGGGATACAACGGACCAGACAAGTTTTAGGATACCAGGGCAAATACCTGAAGAGATcacctaaagcaggggtgtccagtCCTGCTTCTGGAAAGTTCTCTgattaaacacacttgaacca

Function

symbol description
gpr62 Enables arrestin family protein binding activity. Involved in G protein-coupled receptor signaling pathway; inositol phosphate-mediated signaling; and positive regulation of cAMP-mediated signaling. Located in endosome and plasma membrane. Part of receptor complex.

GO: NA

KEGG:

id description
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000012496

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007017 True 1732 mRNA 0.49 2 36231248 36237676

Neighbor

gene id symbol gene type direction distance location
XLOC_003595 grm2b coding upstream 14597 36158134 ~ 36216651 (+)
XLOC_003594 CR933559.1 coding upstream 84401 36052731 ~ 36146847 (+)
XLOC_003593 camkvb coding upstream 789900 35364445 ~ 35441348 (+)
XLOC_003592 NA coding upstream 916014 35298843 ~ 35315234 (+)
XLOC_003591 mst1rb coding upstream 992492 35196587 ~ 35238756 (+)
XLOC_003597 zgc:172270 coding downstream 6098 36243774 ~ 36249902 (+)
XLOC_003598 sypl2a coding downstream 117672 36355348 ~ 36376073 (+)
XLOC_003599 atxn7l2a coding downstream 141617 36379293 ~ 36407866 (+)
XLOC_003600 cyb561d1 coding downstream 170960 36408636 ~ 36415700 (+)
XLOC_003601 ldlrad2 coding downstream 239805 36477481 ~ 36489816 (+)
XLOC_003369 CR854846.2 misc upstream 20108166 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 23519252 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 23536985 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 23545649 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 23551220 12679732 ~ 12680028 (+)
XLOC_003590 NA non-coding upstream 1036710 35189723 ~ 35194538 (+)
XLOC_003588 CT963136.1 non-coding upstream 1137526 35093605 ~ 35093722 (+)
XLOC_003583 NA non-coding upstream 1670509 34551024 ~ 34560739 (+)
XLOC_003602 CU928222.1 non-coding downstream 256418 36494094 ~ 36500806 (+)
XLOC_003603 CU928222.3 non-coding downstream 267998 36505674 ~ 36515323 (+)
XLOC_003604 CU928222.2 non-coding downstream 282295 36519971 ~ 36528422 (+)
XLOC_003605 CR457444.5 non-coding downstream 303875 36541551 ~ 36547269 (+)
XLOC_003606 CR457444.2 non-coding downstream 317260 36554936 ~ 36561802 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G436319 NA non-coding CI01000306 null 8965702 ~ 8970622 (-)