XLOC_003588 (CT963136.1)



Basic Information


Item Value
gene id XLOC_003588
gene name CT963136.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 35093605 ~ 35093722 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007007
tgCCACAGACATAtcatcctgcagcccaagaccggttacttactgaagctaagcagggctaagcctggccactacctggatgggagaccaaatgggaaaactaggttgctgttggtaG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082997

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007007 True 118 rRNA 0.52 1 35093605 35093722

Neighbor


gene id symbol gene type direction distance location
XLOC_003587 inka1a coding upstream 36998 35048642 ~ 35056607 (+)
XLOC_003586 gnai2a coding upstream 51411 34921492 ~ 35042194 (+)
XLOC_003585 slc38a3a coding upstream 178748 34824099 ~ 34914857 (+)
XLOC_003584 si:dkey-202e22.2 coding upstream 313983 34760628 ~ 34779622 (+)
XLOC_003583 NA coding upstream 532866 34551024 ~ 34560739 (+)
XLOC_003589 mon1a coding downstream 77684 35171406 ~ 35185057 (+)
XLOC_003590 NA coding downstream 96001 35189723 ~ 35194538 (+)
XLOC_003591 mst1rb coding downstream 102865 35196587 ~ 35238756 (+)
XLOC_003592 NA coding downstream 205121 35298843 ~ 35315234 (+)
XLOC_003593 camkvb coding downstream 270723 35364445 ~ 35441348 (+)
XLOC_003369 CR854846.2 misc upstream 18970523 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 22381609 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 22399342 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 22408006 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 22413577 12679732 ~ 12680028 (+)
XLOC_003581 NA non-coding upstream 690798 34397567 ~ 34402807 (+)
XLOC_003579 NA non-coding upstream 1243316 33844208 ~ 33850289 (+)
XLOC_003575 NA non-coding upstream 1535512 33312576 ~ 33558093 (+)
XLOC_003594 CR933559.1 non-coding downstream 959009 36052731 ~ 36146847 (+)
XLOC_003602 CU928222.1 non-coding downstream 1400372 36494094 ~ 36500806 (+)
XLOC_003603 CU928222.3 non-coding downstream 1411952 36505674 ~ 36515323 (+)
XLOC_003576 BX119916.1 non-coding upstream 1664613 33428874 ~ 33428992 (+)

Expression



Co-expression Network