XLOC_003586 (gnai2a)


Basic Information

Item Value
gene id XLOC_003586
gene name gnai2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 34921492 ~ 35042194 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007004
attttttgttgcattttcgGATTCATTCACGTTTCCAGGCGCAGCACGTTTCACCGATCGTCTTGCTTTTTCATACCTGAGCACAAGGGGGTTGATCTAAACTTTTTTGGGGCAAACTTTTTGTATTTGTGGATGTAAGTTTTTTCCCTCCCCATTCGCGTGATGTAAAACTCCAGCGTCTGGTTACTTGGTTTCTCTCGGGAGCCTTAACGTTAACCGTCAACATATTCCAGGTGTTGTTCAAATTTCATTCAAATATATCAGTTCAGATTTGCCCCAAACCTCAGACGGTTTGCTAAAAATTTTCCGACGCGTAAAAACAACGGTTTTGGAGCTACTTGTGTCTTAAGGACATTTCCTTTTCTTGGACTTGCGACAGTCGGGTTTTTCTAAAGCCAAAAGAGGAAGTTACTCACGGAAGACTATTTTTAAGGTCTCCTCTCGCTTTAAAAGGGTAATACCTTTTCATTTTTTCTCTTAAATCTATACTCATAAATCCGTCGCCCTGAAGCGCGCATTCGGAACCATGGGCTGTACCGTGAGCCAGGAAGATAAAGCCGCGTTGGAGCGGTCCAAAATGATTGACAGGAATCTGCGCGAGGACGGGGAGAAAGCCGCCAAGGAAGTGAAACTGCTGTTATTGGGTGCTGGAGAATCGGGGAAGAGCACCATCGTAAAACAGATGAAGATTATCCATGAGGACGGCTACTCAGAGGAAGAGTGCAAGCAGTATCGAGCTGTGGTCTTCAGTAACACCATCCAGTCCATCATGGCCATCGTTAAAGCCATGACCAGCCTCAAGATCGAATATGAGGACAGCGCAAGAGCGGATGATGCCCGTCAGTTGTTTGCCCTGTCTGGGACAGCAGAAGAGCAGGGTATCCTTCCAGACGAGCTGGCCAATGTCATCTGCAGACTGTGGGCTGATAGAGGAGTACAGAATTGCTTCACCCGTGCCAGAGAATACCAACTCAACGACTCCGCTGCATACTATCTGAATGACATGGAGAGGATAGCCAAAGCCGATTACATCCCAACCCAGCAGGATGTCCTGAGGACCAGAGTGAAAACCACTGGCATCGTAGAGACACATTTCACCTTCAAAGATCTGCACTTCAAGATGTTTGATGTCGGCGGTCAGCGTTCAGAGAGAAAGAAGTGGATCCACTGTTTTGAAGGAGTGACGGCCATTATCTTCTGTGTGGCCATGAGTGCATATGACTTGGTACTGGCTGAGGATGAGGAAATGAATCGAATGCACGAGAGCATGAAGCTCTTCGACAGCATCTGCAACAACAAGTGGTTCACAGAGACCTCCATCATCCTCTTCCTCAACAAGAAGGATCTGTTTGAGCAGAAAATCACACGCAGCTCCTTGATCATCTGCTTTCCCGAGTATCCAGGCGAAGACAACTACGAAGAGGCCTCCGAGTACATCCGCACCAAGTTTGAAGACCTGAACAAGAAGAAAGAAACCAAGGAGATTTACCCTCACTTCACCTGTGCGACGGACACCAAGAACGTGCAGTTTGTGTTCGACGCCGTGACCGACGTCATCATCAAAAACAACCTGAAGGACTGTGGGCTCTTCTAGACCACACGAGCGAAAGGATGAGATGAGATTACTTGAACAGTTTTGATGAGCAGAGGAAGTAGAGACTCCTGCTTCCACACGACAACTGAGAGCTCCGAGGAGCACAACACAATTTCAGCTATTTCAGCCTCTGTCCAGACACCGTTCCTCCATTGAGTTCCACATTTAATACCTGTATTATTAATTCCTTGGGTAATGACCACAAATCACCAACTGTGTCCATTCTCCACGTTTTCTCCTCTCCTTTTTTTGTTCGAGTAATATCAGAGgcgaaaaaaatgtttgttttttttatacgaTGCTTCATTTTACTCTAGGGAATCTGATGTGCAAATTTTATTCAAGTTTTAATTGCGTaatgcttatttttttaaagaagctgCAGGCATTGGATATAGAGTATGATCGGAAAAAAGGAACATGCTTTTTTATGATGTTTACATGACGTCCTCGTTGATAGCAAAACGGAAAGCCGTCCTGCATGATAAGATAGCAAATATATCAATACAAGTAATCAGTTCACATCAGCATAACAttccttttaaaattaaatacaaaaaaatacaaaaagaacaaaaaaaatatgaaaaagcacaaaaaaagctTCACAAATGGGGAATAAACTGCTAAAACGTAACTGATATTTAAAGTATGTACGTAACAGTATCTAacaatctttttattttcttctcttCTATCTTCCCGATTCCTCTTTCTAGCATTCTGTTTGTGCCTTGACTTCCGTTTACAATGGACTTTGCTTTCTCCCCGAGTTGTCCTACTGTACGTAAACGTTTCTCCTCCAGAATTTTCACACCATGTAAGAAATAAATAGTGATTAATAATGGAAATCTAATTGAGAAAaagggtagttttttttttttttgtttgtttgttcgtttgttttctttctgtttttggtAAAGATTCTTCAAAAATTCTTTTAAAAGTCCTAtataatgatttaatttaaataaaagttcatTCACTAGATGAAA

Function

symbol description
gnai2a Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in G protein-coupled adenosine receptor signaling pathway; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway; and gamma-aminobutyric acid signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in several structures, including head; nervous system; paraxial mesoderm; pronephric duct; and vein. Orthologous to human GNAI2 (G protein subunit alpha i2).

GO:

id name namespace
GO:0001973 G protein-coupled adenosine receptor signaling pathway biological_process
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway biological_process
GO:0007214 gamma-aminobutyric acid signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0019001 guanyl nucleotide binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8365 Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in G protein-coupled adenosine receptor signaling pathway; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway; and gamma-aminobutyric acid signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in several structures, including head; nervous system; paraxial mesoderm; pronephric duct; and vein. Orthologous to human GNAI2 (G protein subunit alpha i2).

Ensembl:

ensembl_id ENSDARG00000018174

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007004 True 2592 mRNA 0.42 9 34921492 35042194

Neighbor

gene id symbol gene type direction distance location
XLOC_003585 slc38a3a coding upstream 6635 34824099 ~ 34914857 (+)
XLOC_003584 si:dkey-202e22.2 coding upstream 141870 34760628 ~ 34779622 (+)
XLOC_003583 NA coding upstream 360753 34551024 ~ 34560739 (+)
XLOC_003582 zmat3 coding upstream 384188 34522554 ~ 34537304 (+)
XLOC_003581 NA coding upstream 518685 34397567 ~ 34402807 (+)
XLOC_003587 inka1a coding downstream 6448 35048642 ~ 35056607 (+)
XLOC_003588 CT963136.1 coding downstream 51411 35093605 ~ 35093722 (+)
XLOC_003589 mon1a coding downstream 129212 35171406 ~ 35185057 (+)
XLOC_003590 NA coding downstream 147529 35189723 ~ 35194538 (+)
XLOC_003591 mst1rb coding downstream 154393 35196587 ~ 35238756 (+)
XLOC_003369 CR854846.2 misc upstream 18798410 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 22209496 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 22227229 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 22235893 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 22241464 12679732 ~ 12680028 (+)
XLOC_003579 NA non-coding upstream 1071203 33844208 ~ 33850289 (+)
XLOC_003575 NA non-coding upstream 1363399 33312576 ~ 33558093 (+)
XLOC_003592 NA non-coding downstream 256649 35298843 ~ 35315234 (+)
XLOC_003594 CR933559.1 non-coding downstream 1010537 36052731 ~ 36146847 (+)
XLOC_003602 CU928222.1 non-coding downstream 1451900 36494094 ~ 36500806 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_08284059_08286677 GNAT1, GNAI2 coding CI01000306 null 8283644 ~ 8287415 (+)