CI01000306_09518431_09519858 (CARD19)


Basic Information

Item Value
gene id CI01000306_09518431_09519858
gene name CARD19
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9517962 ~ 9520720 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09518431_09519858.mRNA
CTATAAATATGAACTCTAAATAGTCATTTTACTGTATAAAGTGTGCTTTGTAGGATCCCTATACACACTGCTCACAAACTTGGGCTGCTTCGACTAGTTTTGCTTCGACAGTTGTCGTTGCTCGATTACGTGTCTTAAAGTCTACTTTGCTTAATATGTTGCATTTCATAAGCCCTATAACCTGTTAATATTGTCCTACTGAACTTATAAGGCGCCTTGTTGGCTAAAAGGCATACAAAACCCTCAATTTACCTCAAAAGTATGTTTGACAGTGTTGCTCTTGCATTCCCCGTGTCTTTGCTCAATATAATATTATTCATGATGTGGCGACACCTTCTGGCCGAAATGTGCACTGCATTCATTTTAATAGAATGGATTATTAAAGTATTAGTTCATCAAAAAGAGAGAGAAAAAAGTAATTTACTCTTGCTCATGTTGTTATAAACCTCTCTGACTTTATTCTTTGGAAATGACAGAGAGCTTCCATGAACAGCTGCGAATAGACAGCCGGTTCCTGAAATCGGACCGACGTCTGGATACAGAATTGGTGGATAAACTCATCCTGCAGCTGAACAGAATCTACCCACAGATCCTGACTGACAAGGAGGCCTCCAAAGAGAAAGGAGAGGAGGCATGTCGAGAGTTTTACCGTGCTCTTCACCTCCACGTGGAAGACGTTTACTTCAGCTTACCCACACGTCTCAAACTCAGAGAGTCTGGAGATCCAATCAGCCCAATCCCGATTGCCACAGAGAGACACGTATTAAATGACCATAGTCCGTTTTTCTTCCTCAGTTGTTTCAGTGTGGCTGTAGGAGCAGCTCTGCTGTATTACTATGGTGAGTCCAAGCAGGTGTCAGGCTCCAGCAGCGCTCTGGGTCTGGCCGCGATGGGTCTTGGTAGAAAAGTGCGAGACGTTCTTATCTGGTACACAGAAGATGGAAAATAATGGATTTTTTGCTGCCTTAAAAAACAACACTGCAGTCGATTCAGAAATACTCAAATATCCATGTCAAACATATAAAAAAATGTTAATTCAGGTTTAAAAAAATATGTACATACTTTGTATATGTATATTCAGAAATTATAGCAAAAGCAAAATTCCAAAGATTTAATGTTAAGATTTCATGCCTAAATCTGAAATCTCGTGTTACAATTTTAAATATAACAATATAGTGATTTATATAACTACATAACGCACAGTTATGCATTTGAAGTAACAGCAATTTACGTGAAATAACAAGAGCAGGAACTCATTACTATTAAACAAACTTACACTAAAGTTTTCAATTGAAGTTGACCTGCAGAGCTGCTGTTAATATTGCAACACTTATTTTGTTTGTGCATTTGTCGTTAAAAAATAATATATTATGTATAGTCAATAACTTTTAATTCTCACAGACTGTCTAAAATTATATTAGTAAAATGTGGACACAAAGGGTTCCACATTTCCAAATCCACTACACTATTTAGTACATACAAAACTGGATAAACATGACAAATCATATAGACAGTAAGACTACAGGTAAATCTGATCTTCAGAGTATTGGGAGTTTGTTACTTTGTAATACATTTTTTGGGCTAAGGTTTAAACAGATATATTTTATTTAAGCATGTTTATATAGCTTACTTTTATACTGGCAGCATGTTTGCACTGGTTTGTATACTAATAATTGATATTGTCAATTTGAACTCTTGTGGCCTTGTTTCTGCAGTGTGATTGTAAGACAACTATTTTGTAAATCTGATATTTTCAGCCTAGAAACATTCACAATTGTTAACTGAGAAACTATTTTTTTTGTCAGGGTTTA

Function

symbol description
card19 Predicted to be active in mitochondrion. Is expressed in musculature system; myotome; and somite. Orthologous to human CARD19 (caspase recruitment domain family member 19).

NR:

description
Bcl10-interacting CARD protein

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09518431_09519858.mRNA True 1811 mRNA 0.36 5 9517962 9520720

Neighbor

gene id symbol gene type direction distance location
CI01000306_09500798_09514840 BICD2 coding upstream 2641 9500475 ~ 9515321 (+)
CI01000306_09475675_09494799 TKTA coding upstream 22107 9475531 ~ 9495855 (+)
CI01000306_09361874_09367807 PARAPINOPSINB coding upstream 150124 9361874 ~ 9367838 (+)
CI01000306_09296908_09305617 NA coding upstream 210985 9296809 ~ 9306977 (+)
CI01000306_09263755_09288503 NA coding upstream 228927 9263589 ~ 9289035 (+)
CI01000306_09536090_09548281 NA coding downstream 13195 9533915 ~ 9548281 (+)
CI01000306_09548430_09553502 WNK2 coding downstream 27710 9548430 ~ 9553502 (+)
CI01000306_09559074_09602026 NA coding downstream 38258 9558978 ~ 9602246 (+)
CI01000306_09625036_09626067 NA coding downstream 104240 9624960 ~ 9626941 (+)
CI01000306_09656951_09671072 NA coding downstream 134675 9655395 ~ 9671766 (+)
G435554 NA non-coding upstream 37869 9436545 ~ 9480093 (+)
CI01000306_09216004_09219290 NA non-coding upstream 262272 9215829 ~ 9219563 (+)
G435540 NA non-coding downstream 81707 9602427 ~ 9603396 (+)
G435589 NA non-coding downstream 176709 9697429 ~ 9698325 (+)
G435590 NA non-coding downstream 183987 9704707 ~ 9737144 (+)
G435609 NA non-coding downstream 225114 9745834 ~ 9748829 (+)
CI01000306_09860935_09865155 SH2D5 non-coding downstream 343426 9860480 ~ 9865724 (+)
CI01000306_09225597_09230504 NA other upstream 291456 9225512 ~ 9231333 (+)
G434545 NA other upstream 2398103 7119317 ~ 7119859 (+)
G433724 NA other upstream 3388184 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 3409787 6106143 ~ 6108175 (+)
G435639 NA other downstream 359200 9878664 ~ 9884919 (+)
CI01000306_09891658_09893015 SNRPE other downstream 370812 9891532 ~ 9893239 (+)
G436932 NA other downstream 1562268 11082988 ~ 11098376 (+)

Expression


Co-expression Network