XLOC_001279 (FO907124.1)


Basic Information

Item Value
gene id XLOC_001279
gene name FO907124.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 28594809 ~ 28607353 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002084
ttagttctgtttggtttttcaacagtattttgttacaaagaaaacaaaagtgatattacggaagcgtagagctgccacccaggtaaaaaaaaaaactgagctttatcacgtttgtacaatatacttttcacgtttgtacaatataatatcacgtttgtacaatataatatcacgttcttacaatataatatcacgttcttacaatatacttatcacgttcttacaatataatatcacgttcttacaatatacttttcacgttcttacaatataatatcacgtttgtacaatatacttttcacgtttgtacaatataatatccatttgtacaatataatatcacgttcttacaatataatatcacgtttgtacaatatacttttcacgttcttacaatataatatcacgtttgtacaatataatatcacgtttgtacaatataatatcacgttcgtacaatataatatcacgtttgtacaatatacttttcacgttcttacaatataatatcacgtttgtacaatatacttttcacgttcttacaatataatatcacgtttgtacaatataatatcacgtttgtacaatataatatcacgtttgtacaatatacttttcacgttcttacaatataatatcacgtttgtacaatataatatcacgtttgtacaatatacttttcacgttcttacaatataatatcacgtttgtacaatataattatcacgttattACGTGAAAACGTAATTGTTTAGGCTACGTTAACCTGGTGCGATTAGAGCGTGAGAAAATGTCTCGTTTAACTCAGTTAATCAAGTTTTATTTTATGCTTGGATTGAGACATGGGGAAATTTTGCAGCTACTGATCAGCTTGGACAATGTTGTTATCAGCATGCGGACACTGAGAAGGAACCTAAAACACATGGGGCTGTACAGGAGGAAGAATGAGTCTGATCCGATGGAAGTGGCTGCATTTCTTATTGATCAGCTCGAGGGACACGGGAGGCTCCATGGATACAAACTACACCACCTGAATTGCATTCAAGCGGGTTATGTTGTCACTCAGAGTACTGTCCGTCATTTGCTTAAATATCTAGATCCTTATGGTGTTGAGCAACGACGCAAAAATCGTCTAATCCGACGGTTGTATGTTAATCCTGGACCAAATTTCATGTGGCACGTCGACTCCTACGACAAACTGAAGCCCTTTGGAATCTGTATAAATGGAGCCATTGATGGTTTTTCGAGAGCTATGATTTGGCTTCATGCCTTTTCAACAAACAGTGATCCCAAAATCATTGCTGGGTATTTCATAGCAGAAGTTGAAAAGAGGCTTGGGACACCTTCCCAGATTCGCTCCGATCTGGGAACAGAAAATGTCACAATGGCAGACATGCAAAGATTCTTGCGATGGAGTACGGATCATAACGTCACTAACTGTTTTATTACTGGGTCTAGTAATCACAATCAGCGAATTGAAAGCTGGTGGGCCTTTCTGAGACGGCATCATGCTCAGGACTGGATGAATCGTTTCCAGGATCTAAAAGACAATGACAGTTTCTCTGGATGCTTTTTGGACAAGCAGCTCATATTGTTTACATGCCTGAACGTCATTGAGgaaGAGCTCCAGCAAGTTGTGCATCTGTGGAACACCCACATTATACGCAGAAGCAGAAGTGCAGTTGCCCCAAGTGGACGTCCGATTCTGATGTACACCATCCCTCATCTTTTTGGAGGACAGGATTATCTAAAAGAGGTTTCTCAGAATTCAGTGGATGTTTGTAAGCAAGAATGCCAACAGAGAGGACCTTATACCTGTGATGAAACAGTTTTCAGCTTGTGCTGCCTTATAATGTCAGAGAACTTCTTAACTCCACCAAGTACAGCAGATGAATCCATTGAACTGTATCTTTTCCTGAGAGCCCATATCCTGAAGGACTTACAACTTGGGCACTTTTACTGATACAATTTTGGGCACATCATTTTATTTGTGTGACAATTTATcacttttgttatttatttgttttcgtTTTCTAATCAAGATCATAGCAAGTGAATGCCGACATATTAAACCAAATCTATGTACTCAATTGAacaatcaaaatgaaacaaatcccTTGACATTAACAATTCCAAATGCAGTGCCAAAGTGTGGTTGCTGTACACTACTTTGTTTTAATAAACTGAGATTTTTAGTTGCAGTGACAATACTATAGTCTAATTTTTGAGAAAGATACATATTATTTGCATAATCTGTAAAAAATTCTTTAAGGTTTTTTCCTAAAAgaaaactatataaatattttgaaaatttacAATGTCTTGTTACTTTTGATATGTCACCTTTTGAATATTGGCAAATTACAATCTATGACTCATTTATTGGTGCATCTTTAACCAGTTCAGCACACGATAATACATAACCTccaaaacattattcagacaaaaggcaggaaaaaacaaaagtacaaagATTCAAACTGCCTTCTTAGTTTAAATATATTCCAGATTCTTTCGGAAGATGAAAACACTGTAAATGTGATCATTCTTTATCTACATCCATAAAATACATTCAacataaataatatgaaatacacctttttattttgtataaggTGGCATTATGTCTTTATGGCTTGAATTTTGAGTATTACAGCATGATGTTTGTAATGGAGTTACTGggttgttttcaaataaaaactcAACTTCAGAGATGATTTTTCAACAATAAAATTCCTCCTTATTTTTAACTGCTTTTTGACTGCATTGTGATTTAAGCACCAATTTAAAGCTTGGTTGTTGGAGCAGGTGGACAATCTGGAGAATACAAAATGAAGATTAAAACTAAACTTAATACCAACTTATACAATGACTGGGTAAAGCACCAATAATTGTGTGTGTAATGATGTTCTATTTGATACAAGTGGCTAACAGTAATGTATTACAAATGGTTTTGGTGtttcttaaaatgttatataatatatgttATATGCTATTCATTGTCATTTATGAGATCTTGTAACCAGTGTCTTTAAATTGGATAAAAACATTGTTCAACTGTTATCCACCCTTTAATAGTTTCTTGTTAACTAGTAAATAGaaataaatcataattatttAGCAATAAACAAACACCGTTATATATAAATCTCCCTTTAATTTGAATGTAAATGGAAGAAAACATGGACTcttaataaacactgtaaaactcaactcAAATACCAGTGTTCTGTGTACTTTTTTCTCGTCAAATATTGCTTCAATAAAAAAATGCCAATTAAATTATCTCAagtcattcttcaaaatattataaagCGAATGATGGCAAAAAGTAAATAagatactttaaaataataaatctcTTGAATTATTGCATTAAACATACAACTTCTTGCATTTCACAGAATTATAACACAGACCTGTTAAAAACAGCCTAGGCAGATCTTAAGAACTGTAATTTTAAACCCTTGCTGCCAAACAATATGAACTGGTTAGACATGCTTAGTTAACATTTCAATTGGTAAACATTTGAACTATGAAACCTTTAAGAACTGTAATTTTAAACAATGTGGACCTCTTGTTGCATAATAATATGAGCTGGTTAGACATGCTTGGTAAACATTTGAATTATGAAACccttaaattgaaaaaaaaaattgttcttgtgaagaaaaaaattatcttcTATTTTTGAAAGGAAATTCAAATACAATTACAGCTTTTTCCCCTAACATATGTAAGctcttcctctttttttcaaaacaaaaatgtgaTCATTATAGGTTATTTTACCATATTAATTTGGACTTCATTGTTCCATCAAACTTTTCATTCTTTGGTTTACACATGGTGTACTTCTATCAGACTATGCTGAACTCGTAAGAGCTTTTGGCGGCTAAAACATTGTCAAGTTCAGTCCGTAGCTCTGGGTAAGAGGTGTAGGTCCATGGTAGTTCCAGAACAGGACCACACGTGTGTGCCACGGGTCGTCGTGCCAATCCATCCGACGATGTGAACAGGACCTCTATCTGGCAAACACAGATGACATCTGACCCAGTAACAAACCTGAACATCCTTCTAAACCCTATTTCATCAAGTCCTCTGATGTACTGTTGCAGAAATCTGAAGCTTTGCTTCTCTGCCTGAGTAGTGGGAGATGCAGAAAACAACTTCAAAAGCTTTCTAGTTGTTGGCTTTTTCTCTTCATACATTTTTAGGACATCTTTTGGACTTTGAAAAGCTTCTTTTAGGAAATGGCTTGCAACTGAGGACATTTTCTCTGCTGCATATGCTGGTTTTTGGATTAACTGTTTGTGTGCAACTTTCAAAAGAAGGCCTTTTAAGTTCTCTGTGGTTGGAAGCACTGATACATCCAGGCGATCCATGAGATCCAGCAGTTCATCCCTGTCTTCATCTGAAAGATCCTCGTTTAGAGCCCTCGTTACCAGATCCCTGTCTGATTGACTAAGATAAAAGAGAAGACTATCAAACAGCATTTCATTTGATACTTGATTTTCACCAAAGATGAGTGCCACCGTGAAAACAGGGGAAAGGCGACAAGGAAAATATCCATGGTCTTGAAATCCCTTCAGTAAAATTCTACCCATGGACTTCCACTCTTCCTCTTGCCATTTAGGGGACAGTGAAGGCACCCTGAACTCCTCCCCTTCAGCTGTGTTATCGAGAAACTCTGACCAAAATGCAGCATACACATCCCTTGATACGCCATCAGCATCATCTCCTTTTTCATCAATATAGATGTATTTTAGAGGGTAGCCCAGGAGTGCTGGATCTTTGAACTGGGTGATCATCTCCTCCAGAATATTGACCCTATGAAGTTTGATGGTGATACAGACAAGATCATATGATGCTGGAGAACTCATTGCTTCATTGCTTATGGATGGGTTTGGAGTACTGACTGCTATGTTTATTGAAGGAGGTGTAAGGGATGTGATGACCAGATCATCATCTTCAAGTATtacagtgtcatcaagatgacaAGCTAGAGGTTCTCCAAGGTAGGGGCCAATCATTACCTCTGATGTGTCCGATGCATCTTGATCGGCATTCGTAAAATCGGATGACAAGACCACAATTGTTTGAGGAGCTTCCATGTCATCTTGAGGTGGATCAGTCAGTTGTGCTGAGGTGTTCACATGCGTTTCCCCATTTTCAAAAGcttcctcttcatcatcatcatcctcatcattgGATATTTTTTTAGTGCACAAGTAAAATCTCAGCATTCCCATTTTAAGTGCATAGTATAGGTCTCCAACTGTGACATCTTCATCAAATACAGCCTCTTCTTGATAGTCCAATATGTCATGATTAAAGACTTCCCACCTCCCAAATTTGTTTTTTCCACTTGGAAAGAAAAGATCTTTAGCATGCTGTAAAATCCCAGATTTTTTGGCGTCTTTGGAAACATGGAAGGTCCTTGTTCCTCCTCCTCTGCGCTTTCTCACTTGCTTCCCTTCATGGATCCACCCCAACTCAATTTTTCGAGTCTTTTTTTCAGCCCATCTATTATTTTGTGCATATTCTCTTTTCCTCTTGGACCCAAATGTCTCCTCATGGTCAGGTTTCTTCTCATTTTCATTGATACCCATCCTTTGCTTCAATCGTTCAAACAATGAGTTTTTTCTTGAATCTTTTGAACTTGCACTATTGTTTTGCAAGCAGAACCGTCTTGCAGCTATCCGATCACCATATGTTGGGATGTAACCAGACAGGGTCTTGTCATCCATGAGATCAATCACTGTGGCATCAATCtgtaatgacaaaaatatttattactttacaAGTACACAAGGTATACCTGCTGCCTATCCTGACTGATTACATTAATTGTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112052

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002084 True 5856 mRNA 0.36 2 28594809 28607353

Neighbor

gene id symbol gene type direction distance location
XLOC_001278 si:ch1073-440b2.1 coding downstream 121322 28391631 ~ 28473487 (-)
XLOC_001277 BX571828.1 coding downstream 230211 28348958 ~ 28364598 (-)
XLOC_001276 NA coding downstream 278308 28308463 ~ 28316501 (-)
XLOC_001275 snapc3 coding downstream 505159 28067771 ~ 28089650 (-)
XLOC_001274 NA coding downstream 844251 27744798 ~ 27750558 (-)
XLOC_001280 ednrba coding upstream 16833 28624186 ~ 28629471 (-)
XLOC_001281 NA coding upstream 100826 28708179 ~ 28709951 (-)
XLOC_001282 GK3P coding upstream 116464 28723817 ~ 28831848 (-)
XLOC_001283 timmdc1 coding upstream 225318 28832671 ~ 28861226 (-)
XLOC_001284 poglut1 coding upstream 267036 28874389 ~ 28890028 (-)
XLOC_001271 NA non-coding downstream 1569965 27018666 ~ 27024844 (-)
XLOC_001266 NA non-coding downstream 1925052 26665758 ~ 26669757 (-)
XLOC_001289 BX908780.3 non-coding upstream 559968 29167321 ~ 29168495 (-)
XLOC_001290 NA non-coding upstream 567149 29174502 ~ 29185227 (-)
XLOC_001291 NA non-coding upstream 569323 29176676 ~ 29178308 (-)
XLOC_001292 BX908780.4 non-coding upstream 716021 29323374 ~ 29326948 (-)

Expression


Co-expression Network