Gene
RNA
| Item | Value |
|---|---|
| gene id | G436405 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 9090130 ~ 9090826 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU500940 | True | 697 | lncRNA | 0.32 | 1 | 9090130 | 9090826 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_09067901_09077320 | USP48 | coding | downstream | 12117 | 9067235 ~ 9078013 (-) |
| CI01000306_09054500_09064951 | NA | coding | downstream | 25179 | 9054169 ~ 9064951 (-) |
| CI01000306_09017460_09019520 | PSMA5 | coding | downstream | 70261 | 9017002 ~ 9019869 (-) |
| CI01000306_09013366_09014513 | PSMA5 | coding | downstream | 75617 | 9013071 ~ 9014513 (-) |
| CI01000306_08986353_09011689 | SORT1A | coding | downstream | 78005 | 8985405 ~ 9012125 (-) |
| CI01000306_09290422_09292579 | NA | coding | upstream | 199278 | 9290104 ~ 9292819 (-) |
| CI01000306_09309973_09348444 | CACNA2D3 | coding | upstream | 219147 | 9309973 ~ 9348444 (-) |
| CI01000306_09374084_09380300 | NA | coding | upstream | 282461 | 9373287 ~ 9380506 (-) |
| CI01000306_09381571_09461159 | CACNA1DA, CACNA1D | coding | upstream | 290361 | 9381187 ~ 9461573 (-) |
| CI01000306_09522093_09523814 | NINJ1 | coding | upstream | 431207 | 9522033 ~ 9525553 (-) |
| G436308 | NA | non-coding | downstream | 116652 | 8973028 ~ 8973478 (-) |
| G436319 | NA | non-coding | downstream | 119508 | 8965702 ~ 8970622 (-) |
| G436386 | NA | non-coding | downstream | 166350 | 8923570 ~ 8923780 (-) |
| G436383 | NA | non-coding | downstream | 168190 | 8921614 ~ 8921940 (-) |
| CI01000306_08864809_08865809 | BRK1, BRK1.S, BRK1.L | non-coding | downstream | 224287 | 8864794 ~ 8866213 (-) |
| G436311 | NA | non-coding | upstream | 7646 | 9098472 ~ 9103121 (-) |
| G436413 | NA | non-coding | upstream | 25948 | 9116774 ~ 9117062 (-) |
| G436415 | NA | non-coding | upstream | 29801 | 9120627 ~ 9120991 (-) |
| G436426 | NA | non-coding | upstream | 113233 | 9204059 ~ 9251009 (-) |
| G436555 | NA | non-coding | upstream | 164620 | 9255446 ~ 9260573 (-) |
| G434338 | NA | other | downstream | 2223194 | 6866656 ~ 6866936 (-) |
| G434086 | NA | other | downstream | 2637879 | 6437406 ~ 6452251 (-) |
| G434016 | NA | other | downstream | 2728487 | 6355180 ~ 6361643 (-) |
| G433985 | NA | other | downstream | 2892920 | 6196107 ~ 6197210 (-) |
| G433670 | NA | other | downstream | 3048847 | 6041014 ~ 6041283 (-) |
| G436446 | NA | other | upstream | 565453 | 9656279 ~ 9671776 (-) |
| G436626 | NA | other | upstream | 744199 | 9835025 ~ 9836323 (-) |
| G436643 | NA | other | upstream | 931322 | 10022148 ~ 10025375 (-) |
