CI01000308_00640975_00648455


Basic Information

Item Value
gene id CI01000308_00640975_00648455
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 640908 ~ 649141 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_00640975_00648455.mRNA
ATATATATGTGTGTGTGTATACTGTGTAGGAAAAAACAAACTTTGCAGTGTCTTTGTATGCTCAGCAATGTGGTATTTGGTCATAGTTCTTATCTTCACAGTATATGGTACCTATGGCTGTGTGATAACAAGTCCAGACCAGAAGGTTAATGATGGTACAGATGTGTATTTGTCGTGTAATTTCCTTCAATGTCCTGGACATCTGGATGTCATGTCTCTCAGTGTGGAGTGGGAATTCCAGAATATCTCTCAGACAGAAATAATCCTGTACTACATCAGCAATCAAATTGTATCAACATTTCCTGGTGTAGTTTTTCGCGGAGATGTCAAAATGGGGAGTTTTGATATACACCTCCCATCCGTGACCCGTGAGAACAATGGAACTTACTTGTGTAGATTGCGTCTCAGTGGCAGGTTCTTCAAGAATTATACACACCTTATTGTCCAATCAGCACAGAGCAGGAGAAACAGTCCAGGTGTGATTCATCCACAGGCTCATCCTCTCTGGTGGCTGGCCCTGGTGTCAGTGGCTGGGTTTGTGTTACTAATTGGTAGTGTGTTTTTTGGAAGGAGGGCTTGCAGATCAATCCAGAAAGGTGACGACTCAAAGCAAAATATGGAAGAGGTTAAAACCAGAACTGCCTCTGAAGACACGGGAATCACATACAAAGTGGGATTCAGCTCTATGCCTGTTCTGGCAGATGTCAGCAGTCCTCCCAACAGTCCAGACAACATCTATATTACCATGGTGTCAACAGTGTGCAATATAGTTGCACTTCATTGTCTGAGCTTCAGCCACTTGACTCTTCCTCTTTATATTCTCAATGACTTCTCATCAGCATGAAATTGCCACTTCTTATAACAGACCCACTGTCTCCGTCTCTGAAGAGGCAGCCAAACAAAATTTACAGAGTAGAGTCTGTAGCCAATAAGTATTGCAGACTCAAATATTCATGCTCACTCTGTCCTTTGAGAGTTGAGGAACCACAGACCAAGAGCATTATTAACACAATGAAACTAGTGGCTAAAACCATTATCGGCATCATGGCACTCTCTGGTTTTATGCTGCCTTAGATAGTGGATGCCTATGTAGAAAATCTTGAATAAGCAGCAGCATCATTGTATTTTTTCAGCACCATTCTCACCCTACATGTGTATTTCCACCTCCAGCTCATCTTTTGTGCACTTTGATCTCCATTAGTGAGGAGATGAGGAGAGGTGGTCCTACTGCAAGCTAGTGCGTCATTTTTTGGTTTTGCGTCAACGGCCGCGTGGATTTTCTTCGACTGATTTCTGATATTCCACTGACTCGAGGAGGGACATATAGGCTAATATGTAGATGCATCCTGATTTTTATCTTCTTATAAAATTAGTTATATACCATTTTATGCATTGCTATTATCGTATTTTAATATTACAACGCTGCAACTTGGTTCGTTTGAAACCTCAATTACGACAAATAGCAAACCACAACCATAATATCAACCAGTGCTCCTGCTACAGACACTGCCAGCCATATCATAGCACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_00640975_00648455.mRNA True 1530 mRNA 0.42 7 640908 649141

Neighbor

gene id symbol gene type direction distance location
CI01000308_00435833_00465809 NA coding upstream 174862 435553 ~ 466046 (+)
CI01000308_00363344_00367355 NA coding upstream 273290 363004 ~ 367618 (+)
CI01000308_00079714_00086440 NA coding upstream 553491 79608 ~ 87417 (+)
CI01000308_00063094_00067540 NA coding upstream 573282 62924 ~ 67626 (+)
CI01000308_00056869_00059824 NA coding upstream 580267 56288 ~ 60641 (+)
CI01000308_00657092_00659557 SCN2B coding downstream 7850 656991 ~ 660488 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding downstream 45999 695140 ~ 699901 (+)
CI01000308_00770560_00784179 NA coding downstream 121131 770272 ~ 785796 (+)
CI01000308_00836074_00942387 DSCAML1 coding downstream 186933 836074 ~ 942387 (+)
CI01000308_00983925_00991307 NA coding downstream 334784 983925 ~ 991389 (+)
G437831 NA non-coding upstream 106377 534330 ~ 534531 (+)
G437827 NA non-coding upstream 112451 528194 ~ 528457 (+)
G437814 NA non-coding upstream 146153 494497 ~ 494755 (+)
G437788 NA non-coding upstream 156517 483599 ~ 484391 (+)
G437509 NA non-coding upstream 377035 177546 ~ 263873 (+)
G437906 NA non-coding downstream 89366 738507 ~ 741264 (+)
G437905 NA non-coding downstream 104556 753697 ~ 755961 (+)
G437917 NA non-coding downstream 136823 785964 ~ 821603 (+)
G437929 NA non-coding downstream 147321 796462 ~ 796886 (+)
G437938 NA non-coding downstream 173248 822389 ~ 822661 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) LOC122358955 NA non-coding NC_056713.1 CM032082.1 2156797 ~ 2159092 (+)