CI01000308_00983925_00991307


Basic Information

Item Value
gene id CI01000308_00983925_00991307
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 983925 ~ 991389 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_00983925_00991307.mRNA
GTAGTCCTGGGCAGAGCACGTCAACCGTGGTGATACTCGGAGAAGTCAAGGATCTAGAGCTGCATCTTTCTGTTCAGCCAGACACACTCACACAGCTAATGTCTGAAATTGACAGGGACAAGCATACTTTACTGTATATGCTGGACCTGCACAGGGAAAAGGTGTCTCCTATGGATCTTACAACAATGCTATATGTAAACACTCCAATCACTGAAGATGACTTTCCACAGAACCCAACAGAGCTCTCAAATGCATTCCTCCGGCGGCTCTGGCTATGTAATCCCCAAGCCCGCAGCACTTACTGCAAGGTACCTGTAGGAGACTACGGTTTGGACATGGATGAGAATTCACAATGTGCTATCAATCCTTTAGACTTGGTTGCTGTCATTTACATGACAACAAATAGTTTCCTACAGCAAGAGATCACCCACAGAATGTTGCAGTGCAACTTTGCAGTGCCTCTGTATCTTCCACCTGTTTACCCAGAAAAGAAGGGGACCATGCTTCTGAATCCATTTAGAGGTGTTCTGGGTCAGTGGAAGTCACCTTCTGAGGGAACTATCATGAAGAACATGGCCAATTCCAGGATGCCATTTCTCTCCACAGTGAGGCTAGGTCGCTGCAGTGTCTCAAAATCTCGAGTACTCAACCGTGTTCTTGGGGGTCCACACAAGCTAAATGAGTGCTTCATAAACTGTGGTATGGATGGAGGGCAGCTGCCTCGTGTTCTCTCAGATGGCCTGGTGGAGATGTGTTGGAACTTGCCTTCAGGAGATCATCATGACAATGTCTTCTCTCGTCCTGTGCTAGTAGCTAATCTCCGTGGAGACGCAGCCAACTGCGAAAAACAGATGAGTCTGCTGTGTTACGCATCTGCAGTCCTCATAGTGTTCTGCGGAAGTTTTGGTGCCAAGGAACGAGAACTGCTTACCTCATGGAGGGAGAATACAAGCCACATGGTTATAATCGACTGCTCAACGTCAGTAGAGGATGGCCGAGAGAATCATAATGAGAAAATTAAACAAAGGCTGGTGAAGGATTTAGAAATGCCTGAAGGAACAATGCTTAATGGCTATGGAGGTAATGAGGAAGAAATTGCTGAAAACTTAAGAGATGTTCTTGATCGCTTTATTCCATACCTGCACACCGCAAATCTTGTAGGTACAGCTGGTATGGCTAGTGACCTCGACATTAATGTTGATGAAGATGAGATCTGTCGAATGGCATTCGGAGAAGTTGAAGAAGTCCTCAGTGGAATTGAAGATGGAATGACCAGCTATTTGGAGAACCAGCTGCCCCTGCAGGGTGAGGTATGGAAACAGTTGTGTCAGCTGGAGAAGGTGGAGGGACGTCACCAGCAACATACAACCCAGAACTTAAGAGAGGAGAAGGAAAATCTTATAAAGCAACTGCTTGATTATAAATTAACAACAGCCATGAGAGCTTTTATTGCAGCTCTCTGTTCATTTGACACAACCAAGCGGGCGTTTTTCCTCTCTTGGATGAGGGTGAAACTTGAAGTTACGCAGTTGGATACACTGTCCCATCTTAGGGGAACAAATGAGGAATGGATGCAAGAACCTTGCATTGGACTTGAACATTTCCTTCGAGAAATGGGATTGATCTATGAACGATACTTCCGCGGTCCAAACAGTGATTTGTATGACATGTTCCGCTTACCGTATGTAGGTGCTGAACTACTTTTGTATGGAGTTCCCCTTGAACTCTATGATGGGGATGCCTCAGTATTTCCCATGAACTGGGTATACAGCGTTCTTTATGAGGTATACAAGCAGCTGCCAAAGTTCAGTCGAATGAGAGTTTTGACAATCTTAGGTTTCCACAACTCTAAGAATGCAGAGATCTTATCTGCAATGTTTGGCGCCAACTTCCCAAAGTGGGGTAGAAGGCATATCAAAGGGGCGTACATGCTTCTCCTCAGCCTGCCTGACAACTTAAGAATGGAGATGGACTGTGAATTTCTGATGTTGATTGACACAGAAGGTTTGAACCGCCAAGCAGGAGGAAGTCTTGTGCATGACATTGAACTGGCTACCTTTGTCAGTGGACTGAGTGACATTACTCTGGTAGATTTACCAGCTGAGGGTCAGGATGGAGCAAGAAGCAACCTTCAGATTGCTGTCAGCGTTCTTCTCTGCACACGAAACTTGGAGAGGAAGACTACCTTTAAGGTTGCTTCAGAAGAAGCAGGAATGGATGGGAAAATCATGAGTTGTGTAATTGATGTACTTACCACAGGAGAGCTCCCAAATGAATCTAAAAAAGAAACACTTCTCACAAGTGAAACAGGGGGTGTAAGTCATAACCTGTCCAGCTCGTGGACCAGCAATTCTGTGACTTCACAAAATGATCAAATCTACAGTGATGCAGTTCTCAGGCTAAAGAAAAGCCTGTTGACAATGTTCCATGAAAAGGCAATAAATGGCCAGCCAACCTGCTTAGGTGCATTAATGGAGTATATGTGCAATCTTTGGGAGAAAGTGAAAAATGGAAATTTTGCCATAAAGTTTGGAGACACAGGTGCAGCTGATGCCATCATTGGCCTTTGCACAAAACTTGCACAGGGAGAGAAGCAGCTCAATGATCAACTAGATCTTTGGGTTCAAGGGTTAGACAATCGCATAACAGAGTTAAAAGAATCAGCATCACAAAATGGACAAGGTATGGATTCAGATGGCGTACTCACAATTTTGAGGAATGAAGCAACTACCCAAATCAGTACAGAGAGAGACCAAATTAAGGCAAGTCTCTGGGACTACCTTAGGCAGGAGGATATTGATATTGCCCTTGTGGAAAATTATAAAGGAAGCCTTCTCAAAAGAGTAGACCTCATTCAAGTGCAAATGACATCTGATGTTGCCCAGAAACTTGAGTCTGCTGCCATTCGCCATGAAATGACAATAAAGATGCGTGCCTTATTGACATCACTTGAAGCAGCCCTGGAGGTAAGGTTACGTTCACTCTTGCAGACCTGCAAAAACAATGACTGTGTGATTGAGGACAAGGAGCTTCAACGTGAATTTGTTAGTGTTTGGGAAAATATCCCATCCAACATGAAGGAACCCCCCCTAGAAACACAGGAAATCTTAGCAAGGATGATGGAGCAGCTAAAGAAAAACCTAAGCAATCGTGGTCTAAAAAATCAAAATGTTAGACTCCGAAATGCAAACCAACTCAATGGCTTTAAAGTGAAGACTAGCCATTTTGCTTTGAGTAGTAAGATGAAGAAAACATTGAAGTACAATAAGAATGTTGCACAAAGATTCACCAATAATTTGATAGAAGACTGTGACAAGAGAGTCTCAGAAAAACTGAAGCACAAAGAGTGCTATTCAGACAGTTACATGAGGGAGTTGCTTGCAATTGTGGATAAGGGTCTAGAAGTTTTAAAAAGTGAGTCATTCATGATGAGTCCCAAATTTGAAGCGGATATCAAAGGATACATCTGTAGCAAAGCACTGGTGTCATTTCAAGAGGTGCAGCAGTTGCTCATAAGGGAAAGAGAAACTAAAGAAAGATTTCTAAATGAGACCAAGGACAAGCACATGTTGAATTTCATATATCAGTTCCGAAAAAGAGACCAGTGTCAAAAAGCTGCTCATTCTTTCACCAACCTGTGCCTCAAGCCAACAGCTGAAGACTTCATTTACAGCAGTTTGGAGAGACAGATATTTGATGACATGCTCCAGAACAAAAATGCACGGCTTTATAGCTCACCAAAGAAGTTCCACTACGGTCTACTTAAAGAAATGCTGCTAAAGGATAGCTTTGAGAATTTCCATGAGTATCTTCAGTCCCATGAAAGCTTCAGCTGGAAGAGTATTGAGAACTTTATCAGAGCTCATCTGTCAGGTTCTGTTATGATCGAAGACCGCAGGGAACAGAGAATGCACCAAATCTTTGATTGGGTAAAGAGGTGCATTAATCAGGAATCAGAATCTAGTAGTGGGGCACAAAGCAATGTTAGACTACTACTGGAGAAAGTTTGCATCAGCCTGGAGAGTCTGGGAAAAATCACTATGCCAACTCAAATCTTGAAAGAACCTTTGTTTGACATAAGTACACATCGTGAGCACTTCCTTGCAGACCTACAGGAATCAGTCTCTGTGCTGTCCTCATCAATTGCTCAGGAATTTATGGAGAATGAGGATGTCATTGAAGTCCCTGATGACCTCCCTAATAAACTTGAGGACATGCTGTACGACAGAGTGAAGGGGTGTGATAAGCGTTGTCCTTTCTGCAAAGCTCCATGTGACCTGGAAGAAAAAGAACATCAAGTGCACGAAGCTGTTGTGCATCGACCTAAAGGCCTAGTGTGTTATACCAATGCCAACTCCACCATTCTTTCCCACAACACCTGCTCTGCAGATATTGTAGGACAAAACCAGTTTCAAAACAGACATACAGGGGGCCAGTCTCTGCCCTTTAAGGAGTATCGGTCCATCTACCCAGACTGGAACATTTACCCAGAGGATCCTAGGAATAATGGGCCTGCAGTCTACTGGAGGTATGTGTTCATGAGGCACAACAGTAGGTTTGCTAAAGAATATCAGTGTGCACCTGCTGTATTGCCTGAAGCATGGGGGAAAATCACTCAGGAGGAGGCGCTACAGAGCCTGAGAGAGGCCTTTCACATTACAGAGTGATAATGCCCGTCACCAGCATTATTATATCCATGTTTTCACTTCAGCTGTTAAAACAGTTTTCTATTATAGAACTTTTCTCTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_00983925_00991307.mRNA True 4749 mRNA 0.44 2 983925 991389

Neighbor

gene id symbol gene type direction distance location
CI01000308_00836074_00942387 DSCAML1 coding upstream 41538 836074 ~ 942387 (+)
CI01000308_00770560_00784179 NA coding upstream 198129 770272 ~ 785796 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding upstream 284024 695140 ~ 699901 (+)
CI01000308_00657092_00659557 SCN2B coding upstream 323437 656991 ~ 660488 (+)
CI01000308_00640975_00648455 NA coding upstream 334784 640908 ~ 649141 (+)
CI01000308_01003736_01006059 NA coding downstream 12347 1003736 ~ 1007117 (+)
CI01000308_01132580_01134190 FKRP coding downstream 140636 1132025 ~ 1134414 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding downstream 603176 1594565 ~ 1626825 (+)
CI01000308_01645574_01648364 CADM2 coding downstream 654144 1644246 ~ 1648567 (+)
CI01000308_01667660_01683460 MIPEP coding downstream 676271 1667660 ~ 1683598 (+)
G437853 NA non-coding upstream 90690 878439 ~ 893235 (+)
G437941 NA non-coding upstream 151772 831892 ~ 832153 (+)
G437939 NA non-coding upstream 160775 822724 ~ 823150 (+)
G437938 NA non-coding upstream 161264 822389 ~ 822661 (+)
G437917 NA non-coding upstream 162322 785964 ~ 821603 (+)
G437854 NA non-coding downstream 55057 1046446 ~ 1048498 (+)
G437952 NA non-coding downstream 63226 1054615 ~ 1058043 (+)
G437985 NA non-coding downstream 93947 1085336 ~ 1087243 (+)
G437837 NA non-coding downstream 119369 1110758 ~ 1114271 (+)
G437843 NA non-coding downstream 146197 1137586 ~ 1167949 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location