CI01000312_00642862_00646991


Basic Information

Item Value
gene id CI01000312_00642862_00646991
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000312
NCBI id null
chromosome length 1039935
location 641824 ~ 647932 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000312_00642862_00646991.mRNA
AAAAAGTTTGAGATCCACCAACCCAATCTCACGGCAGTTCGTACGTATTTTACGAGTTGCCAAATTCGTATGAATTCATACGACCACACTCATACGAATTTGTACGTTTTTTGCTAAATCATACGTATTTAACGAGTTGCCAAATTCGTATGAATTCGTACGAATGACCTACCCCTAACCCCATTCAATGGGGTTTAGACAAATCGTATGAATTGGTACGAGTGAGGTCGTATGAATTCGTACGAATTAACCACCTCGTAAAATACGTACAAATTGGTTGTGAGATAGCGTTGGATCCACTCAGATAGATCTTAGTATTTGGTTATTTTTATGATGAATATACATCTTTCTTTATGCCAAGCTATAATTTTTTTATTAGGTAGAAATTGTGAATTGTGAGTGAGGGAGGGCCTTCAAATATTGTTGTGGACATTGGGGGTGACTAAAGTCTAAAAGGTTGAGATCCACACTGGGATGGATGGATGGATGGATGGATGGATGCCACAATTGACATCTGTTTGAGAGTCTGTGGAGATGTTTTCACATAGATTCCCCCTTTCTCTCCCTTTCTTAGTAAAATCCCTCAGAAATTTTAAAAGTAATACCCTGTAAACCCAAATAAGTTGGTAAAACTCAAAGAATTTGAGGCAATCAGTTGCCTCAAAATTTTTAAGTTAAGAAATTCAATTTAAGTAAGAAGAACTTTTTATTTTGTATACATTTTTATTGTTCTTAACTTGAAATGTTGGTAACACTTTACAGTAAGGTTCATGTACAGTAGATGTCTATAAATGTTAAGACAAAGTAACTCAGATATTTTGTTGTAAATTTAAAAGTAACACATTACTTTACTCGTTACTTTAAAAAGTAATCTGATTATATAACTCAAGTTACTTGTAATGTTACACTGCAAACAAAATAACAGATTCAAGCATCCTCAAATGGTTCCAAAAATATATGTAATCATCCAAACCCAGCTGGATTATTCTGCCAGTTTGACACAGTTGCAGCTGCTCCGGGCACGTGATCTGAAGCTTAAATCAAATTGGACGGCACGTTTCATCGCGGAGCGACAGGGGGAAAAATCGACACACAGGTTGAAAAAAAATCCTCGCTTTTCCGCGCCACAAATGTTCACGAATCGCGCCCAGTGTGAATGGCTTCATAGGGATCTATTGTTTCGATTCAAGAGCGTCGAAAATTCGCGCCGAATTTCGCGTTCAGTGTGAAAGGGCCTTAAGGCTGTCCCAATCCGAAGGCTCCTTCAAATGCAACCTTCAAATGCGTCCTTCATTTCGCAGGCAATGAAGGATAAAACGGATGGATCCTACCCCAGTATTCATTGCGCACCTGTAACGACGAGAAGAGAAATTGCTGGATTACACTTTTAAATGTAAGTAGTATTAGGTTTCAACTTACTCGAATAAGATACAAATGTAAAAATTATATATGTATGTATATATATATATATATATATATATATATATATATATTTGAACATAAACATTTGAACCACTTTTATTTTATATAGTTTATATTCTTTATTATGTACATAAATGGGCCAAGGTGAACATATTTTGAATGCTGTTTGGTTTTTATGCAGTTGAATATACCTTTCAGAAAAGTCCAGTTTAAACGTTACTGCCGCTAGTCAGCTGTCATAGATGCTTGGCGACAAGAACAGTCCTCTGTAGTCTAGACTGTCCTATTTAACAACTCAAGGTCCTTCACGGACTTTGAAGGTGTGGCCTTTGAAATCCGAGTCCTTTAAAGGATCCAGCCTTTGAATTAGGATTCAGCTCTACAGTTTCATGACAGAACTTTGTATTTTATTCATGGCAGAGCAAAGAAATATGTAAATATTTTTTTATTAATATCACTTTTTAAGATATTTTATGTCCATGATTTTAAGTGAAACAGTTAACCTCTGCAAACTTAAAATTCAAACTTTTCATCTTTTTTATTATTTTAAAAATGTTACATTTTATGAAAAAGTTGGCCATTCTTGATCCACTTGAGCTTTTTTCTAAGGTCTCAGATCTTAATTGACTTGGTAAGCCTTAATCTAAGTCAGGTGATGACAATTCCAGAGCTTAATGAACACTGTTAGTCTGAGTCCCTCAGGATGTTGTGGATACGCTCAACAACCCTGGGCTTTTCTAAGGGGCTGGCAGAGGATGAGAAAAACAGACTCGTACAGAGCAGAGGAAGCCCATCTATGTGCTTCCTGCTTGCGATTTTCATGGTTTGTAATGTAATTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000312_00642862_00646991.mRNA True 2267 mRNA 0.36 2 641824 647932

Neighbor

gene id symbol gene type direction distance location
CI01000312_00585354_00590552 VAX1 coding downstream 51202 584955 ~ 590622 (-)
CI01000312_00562199_00564611 ATP6V1BA, ATP6V1B2 coding downstream 77213 562180 ~ 564611 (-)
CI01000312_00518402_00527302 SHTN1 coding downstream 114522 518244 ~ 527302 (-)
CI01000312_00452710_00476302 HSPA12A coding downstream 165522 451458 ~ 476302 (-)
CI01000312_00412226_00428284 ABHD12 coding downstream 213540 411916 ~ 428284 (-)
CI01000312_00720528_00726895 GPR26 coding upstream 71245 719177 ~ 727188 (-)
CI01000312_00840984_00842545 HMX2 coding upstream 192750 840682 ~ 843043 (-)
CI01000312_00849493_00850764 HMX3, HMX3A coding upstream 200884 848816 ~ 851179 (-)
CI01000312_00878228_00881714 NA coding upstream 230139 878071 ~ 882159 (-)
CI01000312_00954156_00962879 SLC22A7B.3 coding upstream 306147 954079 ~ 962972 (-)
G443873 NA non-coding downstream 33065 608451 ~ 608759 (-)
G443805 NA non-coding downstream 245451 395677 ~ 396373 (-)
G443774 NA non-coding downstream 329751 309383 ~ 312073 (-)
G443817 NA non-coding downstream 352220 287029 ~ 289604 (-)
G443761 NA non-coding downstream 513984 126600 ~ 127840 (-)
G443898 NA non-coding upstream 39768 687700 ~ 688006 (-)
G443899 NA non-coding upstream 44319 692251 ~ 692929 (-)
G443900 NA non-coding upstream 46964 694896 ~ 696540 (-)
G443901 NA non-coding upstream 50585 698517 ~ 698994 (-)
G443902 NA non-coding upstream 51153 699085 ~ 699312 (-)
G443871 NA other downstream 33652 604085 ~ 608172 (-)
G443927 NA other upstream 87536 735468 ~ 735813 (-)
G444000 NA other upstream 234484 882416 ~ 883690 (-)

Expression


Co-expression Network