Gene
RNA
| Item | Value |
|---|---|
| gene id | G443873 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000312 |
| NCBI id | null |
| chromosome length | 1039935 |
| location | 608451 ~ 608759 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU509536 | True | 309 | lncRNA | 0.39 | 1 | 608451 | 608759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000312_00585354_00590552 | VAX1 | coding | downstream | 17829 | 584955 ~ 590622 (-) |
| CI01000312_00562199_00564611 | ATP6V1BA, ATP6V1B2 | coding | downstream | 43840 | 562180 ~ 564611 (-) |
| CI01000312_00518402_00527302 | SHTN1 | coding | downstream | 81149 | 518244 ~ 527302 (-) |
| CI01000312_00452710_00476302 | HSPA12A | coding | downstream | 132149 | 451458 ~ 476302 (-) |
| CI01000312_00412226_00428284 | ABHD12 | coding | downstream | 180167 | 411916 ~ 428284 (-) |
| CI01000312_00642862_00646991 | NA | coding | upstream | 33065 | 641824 ~ 647932 (-) |
| CI01000312_00720528_00726895 | GPR26 | coding | upstream | 110418 | 719177 ~ 727188 (-) |
| CI01000312_00840984_00842545 | HMX2 | coding | upstream | 231923 | 840682 ~ 843043 (-) |
| CI01000312_00849493_00850764 | HMX3, HMX3A | coding | upstream | 240057 | 848816 ~ 851179 (-) |
| CI01000312_00878228_00881714 | NA | coding | upstream | 269312 | 878071 ~ 882159 (-) |
| G443805 | NA | non-coding | downstream | 212078 | 395677 ~ 396373 (-) |
| G443774 | NA | non-coding | downstream | 296378 | 309383 ~ 312073 (-) |
| G443817 | NA | non-coding | downstream | 318847 | 287029 ~ 289604 (-) |
| G443761 | NA | non-coding | downstream | 480611 | 126600 ~ 127840 (-) |
| G443781 | NA | non-coding | downstream | 514704 | 93540 ~ 93747 (-) |
| G443898 | NA | non-coding | upstream | 78941 | 687700 ~ 688006 (-) |
| G443899 | NA | non-coding | upstream | 83492 | 692251 ~ 692929 (-) |
| G443900 | NA | non-coding | upstream | 86137 | 694896 ~ 696540 (-) |
| G443901 | NA | non-coding | upstream | 89758 | 698517 ~ 698994 (-) |
| G443902 | NA | non-coding | upstream | 90326 | 699085 ~ 699312 (-) |
| G443871 | NA | other | downstream | 279 | 604085 ~ 608172 (-) |
| G443927 | NA | other | upstream | 126709 | 735468 ~ 735813 (-) |
| G444000 | NA | other | upstream | 273657 | 882416 ~ 883690 (-) |
