CI01000315_00741317_00742390


Basic Information

Item Value
gene id CI01000315_00741317_00742390
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 741102 ~ 743559 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000315_00741317_00742390.mRNA
AGAGAGAGAAATTCAAGCAAGAAATGGACAAACACTGTCTTTTCACTTTTGCTAATGTGTCCACGCTGTTGAAAAAACCAGCATATGCTGGTTAGGTATGTTTTGAAGCATGGAAGCTGGTTTGAGCTGGTTTATGCTAGTCCTTAGCTGGTCACGAGCTGGAGCTAGTTGCTTAGGACCAGCACTTGACCAGCTTAAACCAGCTCAAACCAGCTAAGGACCAGCATAAACCAGCTTCCATTCTTCAAAACATACCTAATATGCTGTTTTTTTAAACAGGTGAAAAAAAAATCAACCTATCAATTAATCCGTCCATCCATCCATCCATCTATGTTTCCACTATATGCCTGGTCCAAAGCATTCTCCCGAAAACATACTGTTCACTGTCATGTCCACTTTTCATTCCCACCTTTTCTGTGTTGAATATTTCAGTGACTCCTTTAGACCCAAGATTGCATATACCACTAGTTGGCATGCAATACTATAAACTGCATAAGATCATATGCTTTGTCACTGCAGTGCCTTGAGCGACACATTGCAACAATGCATGTTGAAGTATTTTAGGGAGGAGCCCAATAGTAGCATGATTACTGCACGACGATAGTGTCTCCTCTTTTGTAATAACGACAGCACTCCACTGCGTCCACTCTACCGTGAAATCAGAATCTCGAGCGAATTGTTCTTTTGAACAGGTTCTTTTTAATGATTCATTCAAACCGAATCGCGCAGCGTTTGTAAATCACAGGAGTAAAACTATGAGGTGGCTAATATAAACCAAAAAAGTATTTTGTACAACCTCGTCGAAAACACAGACAAGTCGCATTACTAAAGTAAAGAATACAGTATCTAAAAAAAGTATGTACCACAAAAATAAAACAATGATAAGTGAAACGATTTGGTGATTCGGTTTTTATGGAGCTGTTCACTGAAACGAACCGATTCGCTAAAATGAATCGGACCTCACACTGCTTACTACCATCTGTTCGGAGCAGCGTGACGCCCCCTGCTGTCTGATGCACGAAAGGCGCTGGGCAAGTTTCACACAACCCTGAACGACTCCTCAAAGCAATGTGTGCTGGAATTTGACTCGGGTGATGCTCTTAACAGCGGGTTTCGTATGGTTATTGCTTGTAACCTGAAAGCTGCCGTTTTGCCCGTCCTGAGGTAAAATGAGCAGCACGGATATCCTGGAGTCGGGAGAGGAGCCCTGCTTTCGCCTGGAGCACCTACCGGGCAAGAGCCCGCACCTAGCGGGCAAGGCGTCTCCGCAGGTGAACAGCCGCTGGGATGCGCCTCAAGTGACGGCCAACGGGGTCCATGACATTGAGGATCGGATTTTACGAATTACAGGCTATTACGGCTATAACCCCGGGTACTCCAGCCACAGAATCTATTGTAATGCAATCGAAAGAGTCTTGACACAGGACAGATTTGAGGATCCGTTTTTGTTAGCAGCATGCATTATTATTGTGGCCAAGTGTAAGTGCAAGTACATGGCGAATGCATGAGCGGTGGTGTAGCCTGTGTCTCTGGTGTGCTGTTATTACACTGGTGCAGTATGTAAGTACATGAATCATGTCTAATGAATATCAGTATGTATGTGTGCATACATTTGTGTTGAAGTCCCTGAGGACGATGGATGGTTACTGTATTCATCTTTGCCACTTGTTGTTTTACATAAGCACATCACACATAACAGGCCGTGCCAGATATGCCAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000315_00741317_00742390.mRNA True 1723 mRNA 0.44 2 741102 743559

Neighbor

gene id symbol gene type direction distance location
CI01000315_00708672_00717317 SLC35F4 coding downstream 23785 708602 ~ 717317 (-)
CI01000315_00698591_00702796 NA coding downstream 38073 698360 ~ 703029 (-)
CI01000315_00661758_00677566 EXOC5.L, EXOC5 coding downstream 63536 661638 ~ 677566 (-)
CI01000315_00580737_00582649 OTX2.S, OTX2, OTX2.L coding downstream 155610 580679 ~ 585492 (-)
CI01000315_00552423_00553730 NA coding downstream 187372 552063 ~ 553730 (-)
CI01000315_00804433_00812661 NA coding upstream 60499 804058 ~ 813688 (-)
CI01000315_00839331_00842291 ZDHHC22 coding upstream 95246 838805 ~ 842291 (-)
CI01000315_00884860_00885026 NA coding upstream 141099 884658 ~ 885026 (-)
CI01000315_00903374_00907477 NGB2, NGB1, NGB coding upstream 158608 902167 ~ 907477 (-)
CI01000315_00912164_00920580 NA coding upstream 168329 911888 ~ 920580 (-)
G447231 NA non-coding downstream 33877 706496 ~ 707225 (-)
G447225 NA non-coding downstream 55992 684866 ~ 685110 (-)
G447219 NA non-coding downstream 90630 650176 ~ 650472 (-)
G446796 NA non-coding downstream 171370 569450 ~ 569732 (-)
G446789 NA non-coding downstream 177869 563010 ~ 563233 (-)
G447262 NA non-coding upstream 83306 826865 ~ 827077 (-)
G447266 NA non-coding upstream 84973 828532 ~ 829282 (-)
G447265 NA non-coding upstream 91743 835302 ~ 838105 (-)
G447313 NA non-coding upstream 130765 874324 ~ 874541 (-)
G447322 NA non-coding upstream 191966 935525 ~ 935772 (-)
CI01000315_00272349_00277104 NA other downstream 463951 272344 ~ 277391 (-)
G447377 NA other upstream 585449 1329008 ~ 1330164 (-)

Expression


Co-expression Network