CI01000315_00912164_00920580


Basic Information

Item Value
gene id CI01000315_00912164_00920580
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 911888 ~ 920580 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000315_00912164_00920580.mRNA
ATGGATCAGATGACAATGGAGGACAGGAAGAAGTCTGAACTATCTCTTGAGGTCCATTTGGAGGCTCTGAAGGCCAAAAGCAAGCAGCAGCTGGAGAATTTAGAGCATCAGCACCAGACTGGGCTGGAGAAGAGGGTCCTGCAGAACTCACTGCTCACCAGCAGCACTGAGTGGATACTTAAAACCAATATACTGCAGCAGAGCATCAGCGATCATGATGGCCGATACTCTGAGAACCGCAAACACCACAGCTCAAAGGTGATTCTGCGGAATTTTACATCAAGTGGAATCAAGCCACCAAGAACTACTGGAACGAATTCTCAGGGAACGGTGACAGAGAGGCAGAGGAAGCCTCTCCCCCAAGATTCACAGAAAGCCAAAGAGGAGGCAGAACTGGTTGAGTGTCAGAAACAGTTTCGTGTTGCTCCCGTCCCTGAGCACATCATTAAACCTCTTTATAATGACCTCATCCATGAACAAGAGCGCTTGAGGAAGGAAGGTCGTGAGCAGAGGAGAGATTTCCTCTTGACCATGCAGAAGCCCTTCAGGTTCCACAAGAGGGAGGAGAAGAAGCAAGAGAGGCTGAAGGAGGATAAAAGTGAAAAAACACAAGCAGTTTGTGTGAGGAAACCTATACCCAAAGCAGTTTCAGACCCCAGGTTTCCTGAACAGTTAAAAGAACAGGAGCAGCAAAGGAAGATTTGCATTCATCTGAGAGCTCAGGAGACTCTGAAAGCTTCCTCAGCACCTATTCAAAGGAAGGAAGCCAGTGCAGATAGCCAAAGCCGCAGTGCTCAGAAGAGCAAAAACAAGATGCTGGGTTACTTGGACCAGAAGCTGTCCTTCAGACCTAAAACTAACGCCGCTGTGCCTGACTTTGACAAGCTCTACCAGGCCTTTCAACAGAAGGCAATGGAGACAGCAGAGAGGAGAGATGTCACTCAGTGTAAACCCTTCCAGCTGCGCACATCTGCACTACAGCCACGCCACAGGAGTCCAGAAAACCCACAGAAATCTTCAGACAAAATGAATCTAAAGAGAAGCAGTTCATTTGGTGGCCTGACATCACTGTCTATGGATACTCTTCCAACTTACATAACAGATGCTGCCAGGAAAAGATCCATGGCTGTAAGGAGATCTCTGGAGCTGAAGGACCTCAAGGAGCAGGAGAACGCAGAGTGGATGAAGCAGCACAGAATCAAATCTCAAGCTATGAGCAGGGCAGTGGCAATGAGAGCCAAAGCAATGGACCCCCATAAGAGTCTTAAAGAGGTCTACCAGGAGAAACTCAAACAGCATCGGCAAGCTGATCTGGAGAGAATGAAAGATTATCAAAAAGAGCTGAAGGAAATCAAATCACGAGTGACAGCTCGCCCGTACCTCTTTGAGCAGGTGTCGCAGGAAAATGCCAAGAATAATGTTGAACGTAGATATAAGAATACTTTGGAACAAGCAGGTTTGGATGAAAATTTCGTGAGATCAAAGGGAGAATCAAGCAAGGACAATGACTCTGTGAATGAGGATCATTACAGCACTGAAAGCGAAACCCAGAAGAGTGCAGGAAGTGGGGAAGACAGTGTCACAAATGAGGAGGAAAAAGAAGGGAATGTGGAAACCAAAGAGGAAGAGTTGTGCTGACAGAAGACGTGTTCCATCAATATTCCATATGTGCAGGGGAGACTGTGGTCAGACAACAAATCACTGGCGGATCATCTTAGTTTTGAAATATTGTGTTATGTATTTATTTATTTTTAACTTGATTGTAGTTTTTTTTTATATATACATATTGTGCTAGTGAAGCAGTGTGGGTCTTTAAATAGCTGAGCCCTCTTGTTGTTTTAATGTTTTTACAATACAGAGGGAATTATGAATGTTCAAGAAATTCAATATGGGTGTCATAACATTTTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000315_00912164_00920580.mRNA True 1914 mRNA 0.45 9 911888 920580

Neighbor

gene id symbol gene type direction distance location
CI01000315_00903374_00907477 NGB2, NGB1, NGB coding downstream 4411 902167 ~ 907477 (-)
CI01000315_00884860_00885026 NA coding downstream 26862 884658 ~ 885026 (-)
CI01000315_00839331_00842291 ZDHHC22 coding downstream 69597 838805 ~ 842291 (-)
CI01000315_00804433_00812661 NA coding downstream 98200 804058 ~ 813688 (-)
CI01000315_00741317_00742390 NA coding downstream 168329 741102 ~ 743559 (-)
CI01000315_00936612_00946276 NA coding upstream 15590 936170 ~ 947084 (-)
CI01000315_00973185_00985720 ALDH6A1, MMSA, ALDH6A1.L coding upstream 52448 973028 ~ 985720 (-)
CI01000315_00991692_00998577 NA coding upstream 70857 991437 ~ 998577 (-)
CI01000315_01001912_01007018 TMED8 coding upstream 81269 1001849 ~ 1007018 (-)
CI01000315_01010057_01020955 NOXRED1 coding upstream 89456 1010036 ~ 1021965 (-)
G447313 NA non-coding downstream 37347 874324 ~ 874541 (-)
G447265 NA non-coding downstream 73783 835302 ~ 838105 (-)
G447266 NA non-coding downstream 82606 828532 ~ 829282 (-)
G447262 NA non-coding downstream 84811 826865 ~ 827077 (-)
G447231 NA non-coding downstream 204663 706496 ~ 707225 (-)
G447322 NA non-coding upstream 14945 935525 ~ 935772 (-)
G447293 NA non-coding upstream 128180 1048760 ~ 1049187 (-)
G447336 NA non-coding upstream 147713 1068293 ~ 1071750 (-)
G447337 NA non-coding upstream 153949 1074529 ~ 1149461 (-)
CI01000315_00272349_00277104 NA other downstream 634737 272344 ~ 277391 (-)
G447377 NA other upstream 408428 1329008 ~ 1330164 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012345 fam161b coding NC_007128.7 CM002901.2 44980837 ~ 45009782 (-)