CI01000315_00991692_00998577


Basic Information

Item Value
gene id CI01000315_00991692_00998577
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 991437 ~ 998577 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000315_00991692_00998577.mRNA
AAATGTCAACCGTATGATGTACCAGGTTCAGATGCCGTTACCTTTACCGAAGCAGCTGATAGTATTTGGTTTAGGGGAATGGTCATCCTTCTCCAGTGACACTGAGATCTCTGTGGAGGTTCTGCTGGGTCCAGAGGTCAAATCACAGGTGAGATCCAGTTTTATCAGCAGCACTCCACGAGTGAGGAGGAAACGTCTAGCGCTGAACCACTCCTCCAATCCGTCCAGCACCCTTCTCAGCAGTGGAGAGAGTCATGATATTTCAAGACATAAGGTTAATGAAATGCCTCAAGGCGTGACTTGTGATGAAGAGAATACACTTAAGAATGACTTCTCCTTACATCTCTTTAAAGATCACCCAGAGATCACCTCCCGAAGGAAGCGTCAGCTGTGCGGAGCTGGGCACAAGCAAAATGGAGACAAGGGAAAACACTCTACTCAATGTTCAGGGCGTGTGGCCAATGGTAAGGAAGGAGTCATCCACAAACTAGTTCTTCAGCAAGATAAAACTCCAAGACGCTCCATTATAGGAATAAAGGGGTATGTTTGGAGTTCTGAAGAACTGGAAAGCCCTCGGGATCCAAACCGAGTTTCAAGCCCGAAGAAACGCAAACTGCGTAAAATGTCTGCAGTAGATTTAGAGGACGAGACTGCCATCAAACGTGTCAAGAGTTGCAGGGCTGACTGTCCGTCAAAGCGCTGGAGCCACGCAATGTGTTTGAGTGATCCTGAAACGGCCATTCTGATTGGTGGAGAGGCTGATGACCAGGCCAGTTGTAAAGACTCGATATGGAAATTGGAGATTGACAATGATTTCTGGTTCCCCATGGACGTCTCATCATCTGATGTCAGTCCACCAAGCGCACAAGGTCACACTGCAACCTTTGATCCCGAGTCTAAAGTCGTCTATGTGTACGGTGGTCTGAGAGACGGCCAGCGATACAATGATATTTATGTACTGGACACTAAAACATGGAAGTGGAAGCTTATTTCTGCAAAGGGAAATATCCCGTCATTGGCATATCACAGTGCCACAGTCTATAAGAAGGAGCTGTATGTTTTTGGAGGGGTGCAGCCCAGCCGATGTCCTGAAGGCAAGGTTTGCAGTAACGCATTGTACATCTTTAACCCAGAACATGGTCTGTGGTATCAGCCGATTGTGGAGGGTGACCGTCCTCTGCCCAGGTTTGGGCACTCCACCACGCTGCTGTCCAACAAGATGATCATTTTTGGTGGGAGAAAAACCGCCACCTACCTCAATGATCTTCACATCTTGGATCTAGTCTCAAATACTAAGTCTTTTCTTTCCTGTGGAAAAGGCTTCATGGAATACACTGCTGTAAAGTACGAGAACATGCCACCATTGGCCCGTGGGTTTCACGCTGCTCTACCCTTGTCTGACAACAGGGTGCTGATCAGCGGAGGCTGCAGTGCTGTAGGAGCCCTACAGGACCTCCATCTCTTTAACATAGATACCAGCTCCTGGACATCAGTGGTGTCCCCATTGCTTTGCTCTAAGCCTCGCGCAGGCCACAGTCTGATGAGCCTGGGTGGTACAAAGGCTTTATCTTCAGACCCGAGGGATGCAAGGGATCGCCGTCATGGCAACAGCCTCTCTTTTCAATGTACCATTCTAGTGTTTGGAGGGTCCGATTGTTTAGGAACCTTTTATAATGACACCATTAAATGCATGGTTGAACTCCCTGTTTAGGATCAGGGACTACGGGATTTTTTTAAGAAATTAATGTAGGGTACTACAGGAACGTAATGGAAAAAATTGGAAAATGAGAAGCACTTTTATCGTTTGTTTTTTAACGTTGCAGTTTTAGCATGAACAGCTGTTTTACAGCTACCGTTTTAATAGTGATTTCCTTAAAAGCAAGCAAAGCCTTCACTCTCACTTGAATGTGTAGTTCAGATTTGTATTTAGTACATTCAGAGACTCAATGTATTTTTGTGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000315_00991692_00998577.mRNA True 1966 mRNA 0.46 11 991437 998577

Neighbor

gene id symbol gene type direction distance location
CI01000315_00973185_00985720 ALDH6A1, MMSA, ALDH6A1.L coding downstream 5717 973028 ~ 985720 (-)
CI01000315_00936612_00946276 NA coding downstream 44353 936170 ~ 947084 (-)
CI01000315_00912164_00920580 NA coding downstream 70857 911888 ~ 920580 (-)
CI01000315_00903374_00907477 NGB2, NGB1, NGB coding downstream 83960 902167 ~ 907477 (-)
CI01000315_00884860_00885026 NA coding downstream 106411 884658 ~ 885026 (-)
CI01000315_01001912_01007018 TMED8 coding upstream 3272 1001849 ~ 1007018 (-)
CI01000315_01010057_01020955 NOXRED1 coding upstream 11459 1010036 ~ 1021965 (-)
CI01000315_01023268_01038848 TTBK2A, TTBK2 coding upstream 24597 1023174 ~ 1038848 (-)
CI01000315_01082437_01097575 NA coding upstream 83367 1081944 ~ 1097575 (-)
CI01000315_01103575_01108954 TMEM206 coding upstream 104639 1103216 ~ 1108954 (-)
G447322 NA non-coding downstream 55665 935525 ~ 935772 (-)
G447313 NA non-coding downstream 116896 874324 ~ 874541 (-)
G447265 NA non-coding downstream 153332 835302 ~ 838105 (-)
G447266 NA non-coding downstream 162155 828532 ~ 829282 (-)
G447262 NA non-coding downstream 164360 826865 ~ 827077 (-)
G447293 NA non-coding upstream 50183 1048760 ~ 1049187 (-)
G447336 NA non-coding upstream 69716 1068293 ~ 1071750 (-)
G447337 NA non-coding upstream 75952 1074529 ~ 1149461 (-)
G447300 NA non-coding upstream 151006 1149583 ~ 1152126 (-)
CI01000315_00272349_00277104 NA other downstream 714286 272344 ~ 277391 (-)
G447377 NA other upstream 330431 1329008 ~ 1330164 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012348 zgc:163014 coding NC_007128.7 CM002901.2 45114015 ~ 45125537 (-)