CI01000325_05782613_05785408 (SERPINA10A)


Basic Information

Item Value
gene id CI01000325_05782613_05785408
gene name SERPINA10A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 5782214 ~ 5785948 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_05782613_05785408.mRNA
AAACCACAAAAACATCTTAGTATGAGATTTTTACAAAGAAAAGGCCGTGTCATTGTCATTAAAACTGCAGAGCTTTGATAAAAAAAACTTAACATTTAAATATATTAGACATATTGTTGGAAGATATAGAGTGACAATTGATTTTATATGTATTTTAGGTTAGTAGTACTGTTATATTGTTATAAATATGTCTTTGATTTACATGAGCTATCAAAATTTGACTTTTTAGCTATATAGCAACATCTGCACCAAATTACATATTTTTGCAAAGTTTGGGCCTCTGAATAAAAGTGTTTTTTCCATATTCCCTATTCTCACTATATCATACTGTATGAACCATAAAAGCCTGAATGATACAAAATATATGCAAACCTTTTTTAGATTTGCTTTTAATTTTTGTCTAAAGGTTCCATAAACCATTCCATTAAAAATATATACAGACTATTATATCATATGTTAGGGTTAATTGTATGAGATCTATATAATGTTGCCATTTGTTGCATTATGATAAATAAAATGGCTGTTTTTCCCTAGAGCATCATGAAGATGGACATCTTCTCCCTTTTGGTCAGAGCAGCTCTCCTTGCTGTGTCGGTTCTTGGGCAAACCACAGATGTTGAAGAGCTTGCCCGAATGAATGCCGACTTTGCTACCCGGCTTTACAGCAAGATTGCTAGCTCAAATGATGACAATGTAGCCATCTCAACCCTTGGGGCTACCTTAGCTTTAGCCACATTAGCAGCCGGGGCTGGTGGGGCTTCTCGTACCGAGCTGCTACAGGGTATAGGTGTGGCCTCAATGGAGAAAGAAGGAGAGCCAGAAAGAATCCAGACCCTACTCCAGCAGCTGAGGGTGATGACTGCTCAAATCCAGGCCACTGGCCTCTTTATGAAGCAGGACATCAAGGCAGATGAAAGCTTCAGCAGCCAGGTTAAGCAGTTTTATGATGCAGATGTTCAAAATGTGAATTATGCCAATGGACAGCTGGCCAAAGGGAATATCGATAATTATGTAAGAACCAAAACAGGGGAAAAAGTCAAAGACGTGGTGGAGAATGTAGATCCACAAAGCATGGCGATGTTAATCAGTGCGGCTTTTTTCACAGGTTATTGGCTGCAACCCTTCAACGCTACCTTCACCCAAGAGGAGCGTTTCTATGTGAGCAAATATAATATTGTGCAAGTGCCCATGATGCTCCGTTCAGGAAAATACTACCTGGCCTATGACCCCACAATAAAGGTTGGCATTCTGAAACTGCCCTGTTCGGATGGCATTGCCATGCTTGTCCTTCTTCCAGATGAAGATGTGGACTACACCTACGTTGACGAATCCATGACTGGTGAAGTGTTCCGCGGATGGGTTGCAAAGCTGAAAAAGACGAAGCTGGAGATTCAGTTGCCCAGATTTTCACTGAAGCAGTCCAACTCACTAAGTACAAGTCTGCCTAGTCTGGGCATTAAAGAGATCTTTGGGAGTACTGCAGATCTCTCTGGAATCAGCAGCGATGAAGGCCTGAAACTGTCAGAGGTGGTACAGAAGGTCACCTTGGAAGTGGATGAGACCGGAGGCTCAGTGGCCGATGCCTCCATCAATCTCTTTACGACCCCTCTTCCTCCCAGGCTCACTTTCAACCGACCCTTCATTTTCGTCGTTTACCATGAGGCCACAAACTCCATCCTCTACATAGGACGTGTTGTCGACCCAACTAAGAACTAAATATGTATAAAGAAACTACCAATGGTGTACTTACAAGTTAATGTATGAGTAGAAACTAGACTGTTTCAAATCCTCACCATTTGTTTTGCTTGAATAACCAACTTAAAATTTAAAATTCATCTGTGTAATATAACAGAGTAGTGCTTTTGATGTTTTAAAACCAAAATACCAGTATAACATAGACACAATACAATGTCTGCTAAGAAAATAACTGTAAATGTATAGTGTTTTCTCAAATGGTTGATTTGGGAAATTTATTGATGGCGTGATGGAGTGTTACCCACACAGTATAATGCTACATGTGACAAGAAACTTGTGCTTCTGGAGATATGCTTTGTCAGTATTGGCATAGTATTCGTATTAACACTTCAACAGGCTGTTCAAATGCAACTCATTAAA

Function

symbol description
serpina10a Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in thrombophilia. Orthologous to human SERPINA10 (serpin family A member 10).

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_05782613_05785408.mRNA True 2115 mRNA 0.40 4 5782214 5785948

Neighbor

gene id symbol gene type direction distance location
CI01000325_05746064_05750106 NA coding downstream 32108 5746064 ~ 5750106 (-)
CI01000325_05706302_05715899 NA coding downstream 66315 5706201 ~ 5715899 (-)
CI01000325_05572394_05599826 BTBD7 coding downstream 182388 5572382 ~ 5599826 (-)
CI01000325_05531464_05543064 ITPK1A coding downstream 239150 5528844 ~ 5543064 (-)
CI01000325_05462254_05467455 NA coding downstream 314759 5461522 ~ 5467455 (-)
CI01000325_05787773_05791837 PRPH2L coding upstream 1655 5787603 ~ 5791837 (-)
CI01000325_05968651_05972436 ZBTB25 coding upstream 181040 5966988 ~ 5972833 (-)
CI01000325_05991862_05992674 INAFM2 coding upstream 204179 5990127 ~ 5992733 (-)
CI01000325_06064671_06069495 NA coding upstream 277883 6063831 ~ 6069640 (-)
CI01000325_06279333_06313435 INO80 coding upstream 492286 6278234 ~ 6313506 (-)
G465862 NA non-coding downstream 12109 5768255 ~ 5770105 (-)
G465851 NA non-coding downstream 26741 5753958 ~ 5755473 (-)
G465849 NA non-coding downstream 44068 5730234 ~ 5738146 (-)
G465812 NA non-coding downstream 88178 5693252 ~ 5694036 (-)
G465829 NA non-coding downstream 127614 5653972 ~ 5654600 (-)
G465923 NA non-coding upstream 107508 5893456 ~ 5893732 (-)
G467017 NA non-coding upstream 149664 5935612 ~ 5935962 (-)
G467018 NA non-coding upstream 150493 5936441 ~ 5936663 (-)
G467025 NA non-coding upstream 160535 5946483 ~ 5946999 (-)
G465716 NA other downstream 154046 5626213 ~ 5628168 (-)
CI01000325_05430077_05434997 NA other downstream 347161 5430010 ~ 5435253 (-)
CI01000325_04815250_04816016 CHURC1 other downstream 966136 4815234 ~ 4816188 (-)
G464576 NA other downstream 2333036 3444730 ~ 3449178 (-)
G467570 NA other upstream 1829538 7615486 ~ 7616830 (-)
G467578 NA other upstream 2160397 7946345 ~ 7955192 (-)
CI01000325_08571807_08594165 NA other upstream 2778682 8568722 ~ 8594736 (-)
G467741 NA other upstream 2893224 8679172 ~ 8697583 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other upstream 3499584 9285532 ~ 9286556 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018124 serpina10a coding NC_007131.7 CM002904.2 27371394 ~ 27381691 (-)