CI01000325_06064671_06069495


Basic Information

Item Value
gene id CI01000325_06064671_06069495
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 6063831 ~ 6069640 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_06064671_06069495.mRNA
AGACTGACAATGTACAGGCACTCACTACTTAGTTGCAAAACTCCTCAATCTGTATTACTTAAGCCATAGTCCCCAATAAGAGTCTGCACAGATCAACTGTAGCTTAAGCCACTCTTGGTGCCACAGACATCATTGTGTTAACTGCATGGCTGCCTTCCCATTGCCCAGCACCTGTCCATCCTGGCAGTTCGGTCTTATTAAACTTTCCTCTGCATCTCACAGCCTATTGAACACATTAGCACCTGTCACATCAGTCCAGCCAAGGTCATCGCTTCTTCTCTTCATTCTCCATCCGGCTGTTAAACACCGAGTCCCGGCGCTCTGCTCTTCAACAATGGAGAGCCTAAGAGGAAACGGCAAGGCTAAAGCCCAGCTACTGGACGCCACCTCGCTTCACCTGGCGGTGGAGGCCTTTTACAAGCCTAACTTCATTCTTTACAAGGACGACGTGAGCAGCAAGGGCAAGGATTACAAAAACGAGTGCTGCGAGACCACCTTCATGGAGAAGAAAGACAAGGACGTAGCGGTGGAGACCCCCAGTACGGAGGACCCGCAGGCTAAACTGCTGGACGAAAACGAGGTGAAAATCCAGACAGTGTCTTATGAGGTAGAAGAAGAGGAATATGTTGAATATGAGTGGAAAAGAGCCACTAATGGTCCTGTTTTTGTTTGGAAGTCACAGGATGTTATGAAAGCAGTATTTTATCTCCTTAAACCCGAATTTGATGGCTTTAAAGCCAATTTAGTTCTTTCTCCTCAGATTGAATTGCCCGTTAGAAAGAATGCACAAAGGATGAATTATCCAGAAAAGATTAAAAAAGAAATTGTTGCATTGCCTTGAATGGGGAAGTGTCTAAATGTCTTAATTGTGATTTTAAGAGATTCTCATTAGTGGATAATAACTTAAGAATCTTCAATGAGCCTACTTTAAATGACAAGATGATGATAATGATTATGTTGATGTAGATTGTCATGTTCATTATCCCTGTTAGTTTTTGATAAGCTAAACTTAAATGGTATAGGAATCTTTATCTAAATATAATCTTTTGGTAATCTCAAAATGAATATCCTTTTTTTTTTTAGATATTATACACATGCATTTTCTTACAATGTGTTGTGATGTTTAAAATCAATTTTACTTAAAAAGAAACATGGAAGAGCTATATATACATCTGTACCATCTATAGTTTTCAACAAAAGGTGTTTACCTGTACAGACTGATTTTGTACTTATTAAGAAAACAAACTGTATTAGAATTTTAATTTCAACTATTTACCATAACATGAAAATAATTGTCAGCTTATCAGCGTTCGGCAGAATTTTAATATTGGTTCAACCCTAGTTACTTTAATTGCATAGATTACTAAGCCACATGCTAAGACCAGTGGAATGCTGGGATGAGAAATGTCACTCACATATAATAGAAATATAGATACACCAATATTAAACTTGTGTCTTTCTTATACTGGGCAATATTTATTTAAATTGAATGATAATAATAATGTTAAATAAATACCATTATAATAATGGATATTTATTTTTAGATATGCTAAAGAATACATTTAACAGTGTTTATCACTTTAAGTGAGCATTAGCAATCTAAATATAAAAATGGGGATAATGAGCACAAACAATTTAATGTCAAATATCGACCAATACCAATAATTAAAAAATAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_06064671_06069495.mRNA True 1681 mRNA 0.36 4 6063831 6069640

Neighbor

gene id symbol gene type direction distance location
CI01000325_05991862_05992674 INAFM2 coding downstream 71098 5990127 ~ 5992733 (-)
CI01000325_05968651_05972436 ZBTB25 coding downstream 90998 5966988 ~ 5972833 (-)
CI01000325_05787773_05791837 PRPH2L coding downstream 271994 5787603 ~ 5791837 (-)
CI01000325_05782613_05785408 SERPINA10A coding downstream 277883 5782214 ~ 5785948 (-)
CI01000325_05746064_05750106 NA coding downstream 313725 5746064 ~ 5750106 (-)
CI01000325_06279333_06313435 INO80 coding upstream 208594 6278234 ~ 6313506 (-)
CI01000325_06316580_06324054 VPS18 coding upstream 246739 6316379 ~ 6324054 (-)
CI01000325_06344050_06345021 PIGH coding upstream 273944 6343584 ~ 6345351 (-)
CI01000325_06357210_06361020 WDR21, DCAF4 coding upstream 287570 6357210 ~ 6361020 (-)
CI01000325_06401629_06421332 NA coding upstream 331989 6401629 ~ 6421332 (-)
G467023 NA non-coding downstream 114828 5948664 ~ 5949003 (-)
G467025 NA non-coding downstream 116832 5946483 ~ 5946999 (-)
G467018 NA non-coding downstream 127168 5936441 ~ 5936663 (-)
G467017 NA non-coding downstream 127869 5935612 ~ 5935962 (-)
G465923 NA non-coding downstream 170099 5893456 ~ 5893732 (-)
G467069 NA non-coding upstream 16081 6085721 ~ 6085952 (-)
G467071 NA non-coding upstream 21333 6090973 ~ 6091233 (-)
G467074 NA non-coding upstream 30952 6100592 ~ 6100845 (-)
G467075 NA non-coding upstream 34322 6103962 ~ 6104203 (-)
G467080 NA non-coding upstream 45746 6115386 ~ 6115593 (-)
G465716 NA other downstream 435663 5626213 ~ 5628168 (-)
CI01000325_05531464_05543064 ITPK1A other downstream 530989 5528844 ~ 5543064 (-)
CI01000325_05430077_05434997 NA other downstream 628778 5430010 ~ 5435253 (-)
CI01000325_04815250_04816016 CHURC1 other downstream 1247753 4815234 ~ 4816188 (-)
G464576 NA other downstream 2614653 3444730 ~ 3449178 (-)
G467570 NA other upstream 1545846 7615486 ~ 7616830 (-)
G467578 NA other upstream 1876705 7946345 ~ 7955192 (-)
CI01000325_08571807_08594165 NA other upstream 2494990 8568722 ~ 8594736 (-)
G467741 NA other upstream 2609532 8679172 ~ 8697583 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other upstream 3215892 9285532 ~ 9286556 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018128 syndig1l coding NC_007131.7 CM002904.2 27822044 ~ 27864964 (-)