CI01000330_01348143_01348817


Basic Information

Item Value
gene id CI01000330_01348143_01348817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 1347818 ~ 1348817 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000330_01348143_01348817.mRNA
GCATAAAAACTTGTGCTAATTTAAAACACATCATATTATAGTAGTCAAGTTTTTTTTTTTTTTTTATCTCTTCCATTTTTGTTTCACAAATTGGTTTGTGTTTCATTATTACTCTGTACATTTTTGCTGAATTACCAGTTAAATAATCTGTACTGGATTTATTTGCTTTAGAGCTTATTTTATATTTCAAAATAAAGCATCTTTCAAAAATCAGTGTCAGTAAAGAGTAGATTTACATTGTGTCAACTTGACATCATTCTTCAGTCATCCAAAACACTTAACCTTAGAAATATTTCCTTTTAAATTTATTTTATTTCCAGCTGCGATGGACATCATAGAACCAATCCTGGCCATTGCAGAAAAACTGTACGATCTCTGTGGGGAGGTGCAGGCCAACAAAAAGCGCTGCAAGCGTTTAGCTCACCGCGTGTCTACTCTGGCTAAGCTGGTGGAAGCTGTGAAGGTTCATGGCTTTGGGACTGAGCCTGAGCAGGTTATAAATGGACTTAAACAACTTAAACTCACTCTGGAGTCAGCAGAGAGGGTAGTAAGGAAATACACTTCCTTCAGCTATTTGAAACGCATCGCAAAAGCGTATGAACTCGGCGAAGAGTTCAGCAGCCTAAATGAAAGACTGAACGATGCAGCTCAGTTACTTTCTCTAGCGCTTCAGGTCGAGCACAGAGGGAGTATACAGAAAGTTTTTCAAGAAGCAACGAGGCGACGGGAAGATGAAGAAGACAGGAAGAGTGACTCTCTGGAACTTCGGGATTTGCTCCAGTCTTTAACCCAGGAGAGCAAAGGAATGAACATGACAGTTGACGCTGTGCGAGAGACAGTAGACCAAATGCAAGGAGATGTGGAGGACATTAAAGACATGCTGGAGTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000330_01348143_01348817.mRNA True 890 mRNA 0.40 2 1347818 1348817

Neighbor

gene id symbol gene type direction distance location
CI01000330_01225611_01226156 ASCL2, ASCL1, ASCL1B coding upstream 120898 1225245 ~ 1226920 (+)
CI01000330_01180674_01200580 PHRF1 coding upstream 146897 1180674 ~ 1200921 (+)
CI01000330_01162093_01168098 RASSF7A coding upstream 179493 1162093 ~ 1168325 (+)
CI01000330_01112605_01119220 NA coding upstream 227712 1112605 ~ 1120106 (+)
CI01000330_01043094_01051071 LDH-A, LDHA coding upstream 296747 1043094 ~ 1051071 (+)
CI01000330_01364642_01375705 HEXA coding downstream 14561 1363378 ~ 1376127 (+)
CI01000330_01388435_01391261 NR2E3 coding downstream 37875 1386692 ~ 1391601 (+)
CI01000330_01392662_01401121 NA coding downstream 43845 1392662 ~ 1401430 (+)
CI01000330_01406033_01412800 CYP11A2, CYP11A coding downstream 57141 1405958 ~ 1412800 (+)
CI01000330_01525860_01549760 STRA6 coding downstream 177043 1525860 ~ 1550534 (+)
G473752 NA non-coding upstream 32147 1314976 ~ 1315671 (+)
G473750 NA non-coding upstream 33723 1313699 ~ 1314095 (+)
G473742 NA non-coding upstream 52701 1294892 ~ 1295117 (+)
G473739 NA non-coding upstream 57810 1289726 ~ 1290008 (+)
G473738 NA non-coding upstream 69179 1278349 ~ 1278639 (+)
G473726 NA non-coding downstream 12675 1361492 ~ 1362086 (+)
G473781 NA non-coding downstream 43101 1391918 ~ 1392272 (+)
G473797 NA non-coding downstream 92615 1441432 ~ 1441645 (+)
G473800 NA non-coding downstream 96497 1445314 ~ 1445518 (+)
G473805 NA non-coding downstream 101028 1449845 ~ 1450284 (+)
CI01000330_02046876_02054740 NA other downstream 697964 2046781 ~ 2054740 (+)
G474750 NA other downstream 1045340 2394157 ~ 2399678 (+)
G474771 NA other downstream 1151285 2500102 ~ 2510170 (+)
G474777 NA other downstream 1162639 2511456 ~ 2514764 (+)
G474807 NA other downstream 1246229 2595046 ~ 2598105 (+)

Expression


Co-expression Network