XLOC_000136



Basic Information


Item Value
gene id XLOC_000136
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 10617524 ~ 10617930 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00002812
taaccgCTGACCCTTGTAGTTgtttttccaacccaggctcattctgaaaatatatcactatatacatttctgtagagtgacaaatacgtcccaggagactttttttttttgcagtttttgtttttgcgaatccaccagaagctgctgtttacactttttaagatctcaaatttctcttgcgagtgccattcgtgcctgctgttcttgtgtaaatccaccagagggcactgttgactgactgacttaacgattgactgacccaccctcctccttcactaaactcaaccaatagtgtcttcaaaagcacagattgaccttcCCACCAGCTTCCCaaaacccaatcgacagttttCAAAATCAATCTAAAAGAAGAAAagcttttgcctttttttttttttttttacatt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00002812 True 407 lncRNA 0.39 1 10617524 10617930

Neighbor


gene id symbol gene type direction distance location
XLOC_000134 dachb coding upstream 120715 10378706 ~ 10496809 (+)
XLOC_000135 NA coding upstream 154642 10462044 ~ 10462882 (+)
XLOC_000133 AL935188.1 coding upstream 253673 10363720 ~ 10363851 (+)
XLOC_000132 pip4p1b coding upstream 292499 10318077 ~ 10325025 (+)
XLOC_000131 zgc:77880 coding upstream 302318 10305611 ~ 10315206 (+)
XLOC_000137 NA coding downstream 27334 10645264 ~ 10668028 (+)
XLOC_000138 NA coding downstream 27434 10645364 ~ 10680841 (+)
XLOC_000139 AL953910.1 coding downstream 44382 10662312 ~ 10663525 (+)
XLOC_000140 MPC2 coding downstream 65913 10683843 ~ 10696603 (+)
XLOC_000141 atp1b1b coding downstream 102364 10720294 ~ 10739221 (+)
XLOC_000121 NA non-coding upstream 665651 9946664 ~ 9951873 (+)
XLOC_000120 NA non-coding upstream 702894 9886955 ~ 9914630 (+)
XLOC_000116 BX323038.1 non-coding upstream 1332173 9277846 ~ 9285351 (+)
XLOC_000143 NA non-coding downstream 162998 10780928 ~ 10787317 (+)
XLOC_000145 CU929103.1 non-coding downstream 762567 11380497 ~ 11380611 (+)

Expression



Co-expression Network