XLOC_013632 (si:ch211-14c7.2)


Basic Information

Item Value
gene id XLOC_013632
gene name si:ch211-14c7.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 46194037 ~ 46208581 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026776
ggataaatgaatgaaaataaacatgTTCACCTAAATTTTGACATTTTCCTCTCAAAAAGTGACTTAAAACCTCACCACAAAGTCTGTCAATTGGAAGCAGACAACAAAACGGGACGTCTCGtttcaaaactttcattttaagttGCCATTACGCGCGTAAAAGAAAGAAGTCTACCAAAAGAGACGGTGCACAAGGGATTCAAAAGGGTGAAGACACAAGGTGACCTACTGTACCCACCAGAACTGACTGAAGATGTAAATGAAGATGCTATAATGAGGTAATGTTGGCGCGTGTGCGTGTCGTGCTCGTGCGTAAACGTGGACGCACCGGCAGCGTGCGCGCTATTGGTCAGCTGAGCGCACGCGCGGGATTGCGGAGGATCTGCGTTGCATCGCCAGTAAAAGCAGCCTGCGCTATGGGGAGACACGGAGGTGTAGCGTGACGTTCAGCACACAGGATGAACATGGGATTTAATAGGCTTCACTAAAATTCGTAGGTCTGTATTCGGATATGCTGCCTTAAACGTAGCGGTGTAATGGATATCTTAATTTCCGCGCAGTCTAAAATCCTCATGAAGGTTAAAGGCAAAATCCTTCAGCCCAGAAGCATCTTCACAACGTACGACAGCTGGAATTGTGTGATTCGTGACATCGCTTTCGGCACGAGGAAAATGACTGGCACACTGTAAAGCCTCCGATATTAATCCCCCGAGAAGAATGCTGCAgcagaacaacaacaataactgctTGGACATGACCCACAGGGATCTACTGAATGAGTGCCGAAGAACCAATGTTTCATTCACCAGTGCCCTTGAGTTTGGAGCCATTCCCCTGATTAAAGGCCTGAGAGCATGGGCTGTGAGTGGCGGCTACTCTAAAGCCAGGAGAAAGGCTAATATTGGACCACGGGCACAGGGCACATGCCAACAGCCCCATGAAAACAGGGTGGGGCAGAGAAGCTGGTCGGCTCCGGTCAGCAGTGGTTATGGGCACGCATTGGAAAGCACAAGTAATGCAACGAGAGCTCCAGGGGTACGGCAAGGCGGACTTGGTGCACTTGTGACTGTGGCCACTTTGAAAGGCACAGAAGCGGGAGGCAGACAGACTCAGACTCGCTGCCTTTTTCTCAAAGCCCAGGGACGAGGCAGCTATATCTGTGCTGTAGGAAACCGAGGGGCAGGGACGAGACTTGTCAGTCCAAGGACTCACACTGTCATCCTCGAAGGGCCGAAGGAGGAGCTTAGACGTTCCTCTAGGGGACCGAGAGCGAGCCAGGATGGGACGGATGAAGGCGGGATGTTCAAGGCCAAGCCGAGGGCTATAAGAAAATGGAGGAAGTGCAGTAAAGCaacaggctcagtggagaaaagAACAGCAGCTCACGGCAGTGGGGAGATTAGTAATCAGTGCATTGAGCTGGAACATGGTGATCAAAAAAGTGCAGAGATTTCAGACACACCAGATAACACCATCACACAATGTCAAGAAGCAACCAGTGCAAATCAGAAAGACCTCAATGATGCAGTTAAAGCTGAAGAGGGTCGACCTGTTGCACCTGAAAACTCTTCTGCAGAAGCATGTGCCAAACTAGATGAGCAGGTTGAACCTGGGATGAGTGATTATCAATTTAATAATGAATTCAAAACAGACTCAAATCGTGCCAATGGTGATGCGCAGGAGATTAGTCCCGATGATCGCCATAACATTAACAACTCACTTGATGACGTGCCAAACCTAGGATCATCTGTAGCACTTGAGAGTACTTCACATACAAAACTCTCCACAACAAACACTGAGCCCAGCGTAGATCATCCTCCCTCTGAAATCGCTGTTCAGAAGGATCAAGAATCCAGGCCAGATGAGCGCCTGCTAGAGCGTGAGAATCTACATTCGGTGGAGACGACCGAGCTCACAGCACTGAGCGATGACACTCCAGACACAAAGGCTACAGCCGTGCCCGAGGGCCGCTGCACAGCGGTGGGTGTTGAATGTAGCACTACAGAGAAGAAGAGGAGGCCGTCAGTGTGCTCGCCTCAGCAATTAATCACGGAGCAACTTGAAGTTCAGCAGTCTGACAAATCCTCTTCACGAGGTTTTACCGCACCAGCGGCTAATGTAACTGTAACCACCATTCACTCCCAGCCTAATCCTGCCCCAACCACCACTGCAGCCATAGCAACAGCCGTCCCAGCATTAGGCACAGGCGAGGAGGGGGCTGGAGGTGGAGACGTGCTGCTTGTGCTGAACTCAGAGTTGCTAACAGAGCCGGTGAGAGTTGACCACGGGGACACGGTGGCCGCTGACGAGGGATCTCTGGATGTGGGCGAGGAGGATGAGTTCGGGGCGTTCATGCAGGCGGGTGCGGAGCAACTGTGGACGGACGAGTCCAAGCAGGTCCAACAGTTGGCTCCAGGAGAAGATGACAACTGTGAACAACACACCAGTTCTGCTGAAGCAAATGAACCTGCATCCTGGGCATCTGATTGGACGGTGGTTCAGTCATGCCAGCAGTCAGAGAGCACATGGGTGGCCTTCAGCCAGGAGACTGCTGAGCAGAAGATAGTGCCTGGTGAACAGTGGTGGCCTTCTACCGAAAACCCAAAACTTTCCCTCTCTCCTCTTCATAATGTGtcaaaTGTGTTTCTAGAGGCCTTTCCCTCAGAAGAATCCCCCTGTGAAGATCCTGGATACATTCCCACACTAAAGCAACTTCTGCAAGGACCAGCTGAAAACAGCAATACAGGAGAGCGCAGGGAACAGAGCTTACTTGATGGCCTGCAGGATCTGGACCGGATGATTGGTGTGAAATATAAGAGGGCGGAGTCTCTGTCTTGTAAGCTTCTCCTTCAGTCACTGCATTTGGAACAATCCAGTTCTGAATGCGTGACGGTTCGACTGAAGTCCACCGCCAGGTTTTCTCCCAATCTCCCATCATCCAACCAACAGTTAGCTGCAAATGCTAAGAGAAGACTGTCATATGACTTTAACAGAAACATCATGACCTAGTCTCACGTTTGACCTATGCTTCCTTGAAACCAGGAGATTCAGGGAAGAGGAATAATGCATCCAGAATAACCGATTCACCCCTGGATTGACTTCTGTTCACCATTTGCTTCAAGTGTATTCCTTCTTTTAATGTCTGTTCTCACTCTGTGTCTGGTAGATTCTGTTTTTCATTCAGCTGTATATCAGCAAatatacactacttgacaaaagtcttgtcgactattcaagttttaggaacaacaagtacttct

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-856 No description available

Ensembl:

ensembl_id ENSDARG00000094522

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026776 True 3260 mRNA 0.49 6 46194037 46208581

Neighbor

gene id symbol gene type direction distance location
XLOC_013631 kcnk6 coding downstream 10575 46171104 ~ 46183462 (-)
XLOC_013630 sptbn4b coding downstream 58110 46099223 ~ 46135927 (-)
XLOC_013629 sptbn4b coding downstream 130264 46056907 ~ 46063773 (-)
XLOC_013628 pcyt1ab coding downstream 173899 46010081 ~ 46020138 (-)
XLOC_013627 NA coding downstream 209133 45983672 ~ 45984904 (-)
XLOC_013633 prx coding upstream 2629 46211210 ~ 46241856 (-)
XLOC_013634 NA coding upstream 45152 46253733 ~ 46258715 (-)
XLOC_013635 pld3 coding upstream 54588 46263169 ~ 46295132 (-)
XLOC_013636 foxa3 coding upstream 141993 46350574 ~ 46354269 (-)
XLOC_013637 irf2bp1 coding upstream 152963 46361544 ~ 46369516 (-)
XLOC_013384 BX323829.1 misc downstream 26651806 19542102 ~ 19542231 (-)
XLOC_013626 NA non-coding downstream 240785 45949801 ~ 45953252 (-)
XLOC_013625 NA non-coding downstream 304131 45883974 ~ 45889906 (-)
XLOC_013623 NA non-coding downstream 495026 45677053 ~ 45699011 (-)
XLOC_013622 CR936403.1 non-coding downstream 548735 45619558 ~ 45645302 (-)
XLOC_013640 NA non-coding upstream 394754 46603335 ~ 46604301 (-)
XLOC_013644 NA non-coding upstream 853918 47062499 ~ 47065867 (-)
XLOC_013645 NA non-coding upstream 863608 47072189 ~ 47082991 (-)
XLOC_013647 CU633933.1 non-coding upstream 1074606 47283187 ~ 47329251 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000028_02165692_02171949 NA coding CI01000028 null 2165692 ~ 2172944 (+)