XLOC_013631 (kcnk6)


Basic Information

Item Value
gene id XLOC_013631
gene name kcnk6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 46171104 ~ 46183462 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026775
ctcactcacacacacgtaTCTCACCATGTCAACGGCGTTCAGGTCCTGCTTTATGCTCATCGGCTTCATTTTGGCGTACTTCACATATCTGTTATTGGGAGCGCTTGTTTTCTCAGCCATCGAGCGGCCCATCGAGGAGTCTCTGAAAGCGGACCTGAGCTCTCTGAAAGCCGAGTTCCTCAACCTGAGCTGCGTTAACAGCACGGCTCTGGAAACCTTCTTAGAAAGAGTTTTAAAAGCTAATAAATATGGCGTGTCGGTGCTTGAAAATGCTTCTCTTCGTACAAACTGGGATTTGGCGTCTTCTCTGTTCTTTGCCAACACGATGGTGACGACAGTGGGATATGGCCACACGACGCCACTCTCAGACGCCGGTAAAGCCTTCTCCATCGTGTACGCTCTGATCGGCGTCCCGTTCACCATGCTGGTGCTGACAGCGTGTGTGCAGCGCCTCATGCACCCGCTGACCTACAGGCCGATCTCCGCATGCCAGCGGCGGGCCGGTCTGCAGCAACGGTCAGCCAGCGTGGTGCACTTCATCGTCCTGCTGTTTCTGGTGGTGCTCTGCTTCTTCGTGGTGCCGTCGCTGGTGTTCAGCGCCATTGAAGAGACCTGGTCTTTCCTGGATGCCTTCTACTTCTGCTTCATCTCTCTCTGCACTATAGGACTCGGGGACTTTGTGCCTGCGGAAAAACCAGGACAGAGTCTCAGAGCTTTGTACAAGATATCAGTCATGGTCTACCTGTTTGTGGGATTGATGGTGATGTTCCTGGTCCTCCGCACATTTCACAAGCTTGCTGATGTTTACGGCTGGACGGCTTTCTTCCACCTGCCGAGCTGCGAGGAAGACGAGGAGGATAAAGAGCCAATAATAGAAGCAGGGCCTGAAGACGATTCGCCGGAGGCTGAGAAGGCCTCAATTAAGCCTCTGGATCCCAGCTCGCAAGTCTCCTACAACTCCATAAATAGATAAAACACCACATCCCTCCACAGTCACATAAGGACAGTGAATTGTAATTTGTGTGGACATGAAACATCAACACATTGCAGGTTAGCAGGGGCTTCAATGTGCAATAAGGCAAACCTTTACTTCACACACTCAGAAAGAAAGGTACaagatctgtcactggggtggtaccttctTAAAGGGGCATTTTTGTACCATACAAgtggacattagtacctttaAGGTACACATTTGTCCCTTAAGGGTTCACTTTTATACCTCTAAGGTAGtctttcccaaccctgttcctgaaggcacacaaACAGTACACATTTTAACCTCTTCCTATTTAAAAACACCTTAATCAACTCCTCAGAACATCAGAAGAGCCTTCAAACGGCTCAGATAACACATCCAAaacatgtactgttggtgtgcctccaggaacagggttgctataaaccagtgtttcccaaccctgttcctgattcaggtgtgtttgattagagagaggttgaaaatgtgtactgttggtgtgcctccagaaaCAAGGTTGGAAAACATTGCTctaaaccagtgtttcccaaccatgtTCCTAAAGACACACcgacagtacacatttttaacctcttcctattcaaacacacctgaatcaactcatccgAACATTAAAAGAGACTCCcaaacctgaagttaatgggtcagataagaaGACATCCAATTTCTGTAGTGtcggtgtgcctccaggaacagggttgggaaacactgctctaggGTACTTTGAGGtactagggttgtcacaatactgggaTTCGGTGCCAATCAATActgatttttaaaagcattaatttcctgctaacatttgagcgcgttCTTTAATGGCgatgattggccattgtgttcacgtgctcaacagaagtgACTCTGATTGGACAATGGATCATTTTAAAACCGCGATTCATCAGCGGACCGCTCGTATGTCGGCTTATAAACAAAgcagctgatcgacgtgactttaaaacactccagtgttccTGTGTCTGTGGCTACAGCtatgagttcggtgaactgatgaccttcacaaccaatcacagtcatttctgttgagcatgtgaacacaatggccaatcagcactgtttaagaacgtgcttaaCATCGCTCACATTTTTGCGGCAAATGAATGGGCTTTTTTGAATATCGGTGCTGATTGGTGTTAAATTCCAGTACCGTGACAACCCTATGTGGTACACGTTTGTACTTTTCAAGTATTAATGTGTATCTTTTAAGGACCAGAAATGTAGTCTTTGAAAAGGTACtgctagggttgtcacgatactggaatttggtaccaatcggtaatgaaattttaaaaacgtcaatTTCCCGCCAACATTTGAACGCTGttaagcacgttcttaaacagcactgattggctattgtgttcacatgctcaacagaaatgactgtgattggccgcgaaggtcatcagttcaccagtTTGTCTATAACCTGACATAAGCTGACAtataaaacgctccagtgtccccgtgtctgtggttacactcagtaaacagtggtgagttcggtgaaccgatgaccttcacAACCAATCAGTCATTTCAAGTTTagtgtgaacacaatggcaaatcagcgctgtttaagaacgtgctcaacagcgctgAAATCTTAGTGGGGAATGGACATGTTTAAAATTTCAGCATCGATTAgtactgaattccagtatcgtgacaaccctatgAAGTACACGTTTCTACTGTTTAGGTGTTTATGTATCTTTAAAGaccaaaaatgtcacttttggGAAGGTACTGCttgggttgtcacgatactggaattggATACCAATCGatgctgaaattttaaaaacgtttcctgctaacatttgagcgctgttgagggcatttttaaacagtgctgattggccgttgtgttcacatgctcaacagaaatgacagtgATTGGGCGTGAAGGTCATCaattcaccgaactcaccgctgtttactgatgATAACCACAGACACAGGgacactgaagtgtttcaaagTCTCGTCCATCATCTGAtttgtttataagctgacataagAGCGATCCGCCAATCAATCGCAGCttcaaaacactccagtgtccccgTGTCTGTCGTTAcattcagtaaacagcggtgagtttggtgaactgatgaccttcacagccattcacagtcctttctgttgagcaccTGAACACAATgtcaaatcagcgctgtttaagaacacgatcatatgttagtgggaaatgaacattattaaaatgtcaGTATCGATCAgtactgaattccagtatcaGGACAACACTATATGGTACACGTTTGTACTTTTAATGTGTTGATATGCATctttaaggtctgaaaatgtaCTTATTCAAAAGTTACTGCTAGGGATGTCACGATATTGGAATTTGGTTAccgatattttaaaaatgtccatttcccgctaacatttgagcgctgctgagcaagttcttaaacagcgctgatttgacATTGTTgtcatgctcaacagaaatgactgtgattggctgtgaaggtcatcagttcaccggtttgtctataagctgacatacgagcgatccacTGATAAATCacagctttaaaacactccagtgtccctctatctgtgtttacactcagtaaacagcggtgagttcgctgaactgatgaccttcacggcaaatcagtcatttctgttgagcacgtgaacacaatagcCAATCAACCGTTCAAGAacacgctcaaatgttagcaggaaatggatgttttttaaatttcagtactgaTCGGTAGCAAATTCCAGTatatttgtacctttatttctgagggtGCAGATGTATTCTGTTTTTTAGAAAATCCTCTTTGTGGATGAAGTAGTTTCATGAACCAAATATTGTTCAGTTTGAAGTGAGCAATTGTGAACTTCAAGACTTGAAGGGATGTTATATTAAATGTTGTGCCTTTGCTTTAGGAAATGTTGCTCGTTAATTCTTAGCATGACAATTATTTAGGGTATGTAATTTGTAGGTTATTAAATGCATGGACCAACTGATCATTCTTGATAAATGTCTACAACTGTTATTTGTCAGTAAGAttgtcattaaagggatagttcaccaa

Function

symbol description
kcnk6 Predicted to enable potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in notochord and yolk syncytial layer. Orthologous to human KCNK6 (potassium two pore domain channel subfamily K member 6).

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0030322 stabilization of membrane potential biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022841 potassium ion leak channel activity molecular_function
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-050309-213 Predicted to enable potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in notochord and yolk syncytial layer. Orthologous to human KCNK6 (potassium two pore domain channel subfamily K member 6).

Ensembl:

ensembl_id ENSDARG00000007383

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026775 True 4113 mRNA 0.44 3 46171104 46183462

Neighbor

gene id symbol gene type direction distance location
XLOC_013630 sptbn4b coding downstream 35177 46099223 ~ 46135927 (-)
XLOC_013629 sptbn4b coding downstream 107331 46056907 ~ 46063773 (-)
XLOC_013628 pcyt1ab coding downstream 150966 46010081 ~ 46020138 (-)
XLOC_013627 NA coding downstream 186200 45983672 ~ 45984904 (-)
XLOC_013626 NA coding downstream 217852 45949801 ~ 45953252 (-)
XLOC_013632 si:ch211-14c7.2 coding upstream 10575 46194037 ~ 46208581 (-)
XLOC_013633 prx coding upstream 27748 46211210 ~ 46241856 (-)
XLOC_013634 NA coding upstream 70271 46253733 ~ 46258715 (-)
XLOC_013635 pld3 coding upstream 79707 46263169 ~ 46295132 (-)
XLOC_013636 foxa3 coding upstream 167112 46350574 ~ 46354269 (-)
XLOC_013384 BX323829.1 misc downstream 26628873 19542102 ~ 19542231 (-)
XLOC_013625 NA non-coding downstream 281198 45883974 ~ 45889906 (-)
XLOC_013623 NA non-coding downstream 472093 45677053 ~ 45699011 (-)
XLOC_013622 CR936403.1 non-coding downstream 525802 45619558 ~ 45645302 (-)
XLOC_013640 NA non-coding upstream 419873 46603335 ~ 46604301 (-)
XLOC_013644 NA non-coding upstream 879037 47062499 ~ 47065867 (-)
XLOC_013645 NA non-coding upstream 888727 47072189 ~ 47082991 (-)
XLOC_013647 CU633933.1 non-coding upstream 1099725 47283187 ~ 47329251 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000028_02175774_02182966 KCNK6 coding CI01000028 null 2175524 ~ 2183460 (+)