XLOC_013935 (AL844521.1)


Basic Information

Item Value
gene id XLOC_013935
gene name AL844521.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 12944850 ~ 12944966 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027836
ggttacagATATCTCATTGTGCAgtccaagaccagttactcactgaagctaagcagggctgagcctggtcagtccctggatgggagaccacattggaaaactagattgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108589

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027836 True 117 rRNA 0.49 1 12944850 12944966

Neighbor

gene id symbol gene type direction distance location
XLOC_013934 cthrc1a coding upstream 17761 12915498 ~ 12927089 (+)
XLOC_013933 mc5ra coding upstream 141442 12762887 ~ 12803408 (+)
XLOC_013932 rnmt coding upstream 263035 12649691 ~ 12681815 (+)
XLOC_013931 ldlrad4a coding upstream 321995 12444943 ~ 12622855 (+)
XLOC_013930 seh1l coding upstream 512862 12406583 ~ 12431988 (+)
XLOC_013936 rims2b coding downstream 154575 13099541 ~ 13186822 (+)
XLOC_013937 NA coding downstream 170299 13115265 ~ 13115526 (+)
XLOC_013938 NA coding downstream 285417 13230383 ~ 13249249 (+)
XLOC_013939 lrp12 coding downstream 430872 13375838 ~ 13397295 (+)
XLOC_013940 srsf4 coding downstream 465937 13410903 ~ 13420490 (+)
XLOC_013928 NA non-coding upstream 643959 12295450 ~ 12300891 (+)
XLOC_013922 CU928061.1 non-coding upstream 1666321 11278413 ~ 11278529 (+)
XLOC_013918 CU628002.1 non-coding upstream 1929992 11013622 ~ 11014858 (+)
XLOC_013906 CR384101.1 non-coding upstream 2377364 10567371 ~ 10567486 (+)
XLOC_013895 NA non-coding upstream 3078128 9838182 ~ 9866722 (+)
XLOC_013942 NA non-coding downstream 686359 13631325 ~ 13635810 (+)
XLOC_013943 NA non-coding downstream 851626 13796592 ~ 13805873 (+)
XLOC_013944 BX530067.1 non-coding downstream 888913 13833879 ~ 13833993 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC118946463 NA misc NC_050572.1 CM025859.1 2685577 ~ 2697335 (-)