CI01180000_11127163_11138849


Basic Information

Item Value
gene id CI01180000_11127163_11138849
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 11126317 ~ 11138849 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_11127163_11138849.mRNA
TTCTCTCAGCGAGGCCCTGAAAGCCATCACTGTGAGCACAGAGCTGGTGGAGGAGGAGCTGAAGCCTCATCTGGATGTTCTGCTTACCCTCCTATTAGAGAAGAGGAAAGGAACAGCAGAGAAAATAGTGTCCAGTGGTGTTCTGCCCATTCTGACTCAAGTCCTGAGGAAGAAGAGTCCCCTCACCTCTCAGGTCACCTTACTGGTGGCAGAAATGGCCAGAGAAGGTGCTGTGAGGGAGCGGTGTATTGAAGCAGGCCTGGTGACCGCATTAGTGCCTTTACTGAAAAGCACAGACCAGGACCAGCTGCTGCACACGGGCCGTGCAATTGGACGGATCTGCTTTGAAAATGGTGCTCAGCAGACGCAGCTGGTGGAGAATGGAGTAATCCCTAGGCTGGTGGCCATAATGCAGCAGTATCCTGAGAATGACCCGCTGGTAAATGTCTGCCTGCTGGCACTCTGCAACCTTGCTGATGTGGGTGCTGCACGAGAGGCTCTGGCAGAAGTGGGTGTGGCGGAGGTTTTGACTTATCAGTTGAAGCGGGCACCGGATGCAGAACGCCGGCATCTCATACTAGAGGTTCTTGGGTCACTAGGAGAGAGTGGTGCTCTGAAACTGCAGTTTGTGGAAGCAGGCGTGCCCGAGGCTCTCTCTGAAATGATTCGAACTCTTCAGGGTGGCTCTGACACACATGACCTCTGCAGCATTAAAGTGGCTTCAAACCTCATAGTGTCCCTCCTATTGGGAGGTGAATCAATGCAGAAGTGTTTTGGGGAAGGAACAGGGATGGTGTATCAGGATGTTCTCTCCTGGCTGCAGTCATCAAACACTGAGCTGCAGTTGTCAGGAGCTCTGGCCATTGCTAACTTTGCCAGAAATGGCAGCAACTGTGTGAAGATGTTGGAATTAGGAGTTGTTCCTCATATTCTGGACCTGTTGGAGCAACATGTATCAGAGGGAGATGTATCTGTGCAGCACGCTGGCCTCAGTGCACTTAGAAATCTCGCCATTCCAGGCTCCAATAAGGTGCGTATGTTGGAGGATGGAGTCACGGAAAGGATCAGGACCCTTCTGCGCTCTGACATGCCCCCAGTCCAGTTTAAACTGTTGGGCACTTTGCGCATGATGGTGGACGGCCAAGGGGAAGCAGCTTCAGTTTTAGGGAAGGATGAAGCTCTGTTAGCACGAGTCATGGAGTGGTGCGAGAATAAAGATCACGCTGGTGTCAGAGGCGAGGCCAATCGCCTTTTAGCAGCTCTCATAAGACACAGCCGAAACCCTGAAGTCATCCAAACTGTCATTAAAGCAGATGGAGTCCAACATCTCATCTCAATGGCAACCAGTGAGCATGTCATCATGCAGAATGAGGCTTTAGTTGCTTTGGCCATTGCCTCTGCAATAGACATTGGGGCGGTACAAGAACCATTTCTGGATGCAGATCTCCTTCCCACCTTACAGAAGATGCTAGATGACCCTGTTGTGGCCGTGGAGGTCAAATTCAGTGCTTTAGGCCTCATCTGCAGCCTTGCCAACTCCAGCATTTTAAGGGAGCAGATAACATCTCTAAACCTGAGGGATACCCTGTCCAAACTGTCCAATCACACCAGCACAAAGCTGGCTAAGCAAGCCGACACGGTGATGGCTGTTCTTTCTGAAACTGCCTAGACTTGCATATCTTGTATAGTCATCCTTAAGGGGATATTTTTAGACAGTTCGTTCCCATAAGGACAGTAAAACAAAAAAAGTTACACCATCTAGCTTGGCATATAGTCAGACCAAAGCAATATAAATTTACCCCAACCACTTTGGTGAAAGTTGGTGCGATTTCATCATCTAAAGTAAGAAGAAGTCAGTTTGTCCATGATAGATGTCATTTGTTGTCAGCTATCCCAGGGACAGGAACACTTGGGAGACAGTCTATCCATCAGACATCAGTAATGAACCTGCTGCCCTCCTAAACAAGAAACAGAAACAACTCTAAATTCATGAGGAGTGTTCAGTGGAAAATAACTTCGTAAATATCTGCATACAAACATGCAATTATATTCTCCATGGACTTCCATTGTAAGAGCACTAGATCTAGCAAAGCAGCTGTATCTATCTATGAGCTTGCTGTCTGTCCATGGAAATGAATTAATAACATTTAATTTTATGTTGCACACCAATGTACTACACTGCTGTTAATATGAGTAGTGTTATATTTGTCTTGTGGTTTCTTTTATCAGAGTATGTTAACACTACTGATTGATATTTCATCTTAAAGTTATAAAATGTGGAAAGAAAAAAAAAGGTTAGAAAAGAGTATGTTTCAGGTTGTAACATCTATTTTCATATCATAGCTGGCCTTACTACTTTAGTTTTCTTCTGTAGGGCTTTTTAATGCAGATTCTTTGATCATGTTGATCATTTATTTCTAGCTAGCCATGAGCACAAACCTGAATCTCCATATCGTGAAAGCAATAGCCAGAAACATATCAAGAACAGTTCTTGAGCTTCCTAAGTCTAAATAAAA

Function

GO:

id name namespace
GO:0005829 cytosol cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_11127163_11138849.mRNA True 2516 mRNA 0.46 13 11126317 11138849

Neighbor

gene id symbol gene type direction distance location
CI01180000_11111159_11112550 NA coding downstream 13767 11110801 ~ 11112550 (-)
CI01180000_11106711_11107109 SPRN coding downstream 18423 11106466 ~ 11107894 (-)
CI01180000_11098239_11100667 ELOVL6L coding downstream 25650 11097736 ~ 11100667 (-)
CI01180000_11091600_11093609 NA coding downstream 32627 11091322 ~ 11093690 (-)
CI01180000_11077923_11087065 TSN14, TSPAN14 coding downstream 39252 11077923 ~ 11087736 (-)
G686008 NA non-coding downstream 3356 11121941 ~ 11122961 (-)
G685987 NA non-coding downstream 39367 11086625 ~ 11086950 (-)
G685961 NA non-coding downstream 119000 11007058 ~ 11007317 (-)
G685953 NA non-coding downstream 142471 10980248 ~ 10983846 (-)
G686010 NA non-coding upstream 4801 11143650 ~ 11143855 (-)
G686014 NA non-coding upstream 9702 11148551 ~ 11148765 (-)
G685993 NA non-coding upstream 14510 11153359 ~ 11156481 (-)
G686034 NA non-coding upstream 40388 11179237 ~ 11180974 (-)
G686050 NA non-coding upstream 195412 11334261 ~ 11335218 (-)
G684929 NA other downstream 1224929 9895316 ~ 9901388 (-)
G684493 NA other downstream 2402450 8722693 ~ 8723867 (-)
G684182 NA other downstream 3215109 7910761 ~ 7911208 (-)
G684080 NA other downstream 3543514 7579404 ~ 7582803 (-)
G684071 NA other downstream 3600663 7506890 ~ 7525654 (-)
G686052 NA other upstream 202767 11341616 ~ 11343496 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006576 si:dkey-191g9.5 coding NC_007124.7 CM002897.2 21712284 ~ 21739142 (-)