G678595


Basic Information

Item Value
gene id G678595
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 503871 ~ 551174 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799246
CGGACTGCTTCACAAACGAGGGTCAATTCAATGCTGGATTTGCACAAAAGATTAACATGACGACACATGCTAGTCGATGAGTTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACATCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGTCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799246 True 266 lncRNA 0.41 2 503871 551174

Neighbor

gene id symbol gene type direction distance location
CI01180000_00427700_00437883 NA coding upstream 65405 427650 ~ 438466 (+)
CI01180000_00368639_00375465 ZC3H6 coding upstream 127624 368639 ~ 376247 (+)
CI01180000_00361420_00364335 NA coding upstream 138745 361420 ~ 365126 (+)
CI01180000_00306160_00314770 NA coding upstream 188127 306160 ~ 315744 (+)
CI01180000_00263000_00297934 MERTK coding upstream 205405 263000 ~ 298466 (+)
CI01180000_00661446_00671602 MSH6 coding downstream 109935 661109 ~ 672188 (+)
CI01180000_00737754_00743866 NA coding downstream 184136 735310 ~ 744211 (+)
CI01180000_00765917_00776252 NA coding downstream 214623 765797 ~ 776911 (+)
CI01180000_00812535_00858607 NA coding downstream 260683 811857 ~ 859005 (+)
CI01180000_00862066_00867985 NA coding downstream 309572 860746 ~ 868112 (+)
G678442 NA non-coding upstream 11240 445739 ~ 492631 (+)
G678554 NA non-coding upstream 16728 434733 ~ 487143 (+)
G678521 NA non-coding upstream 59289 351957 ~ 444582 (+)
G678444 NA non-coding upstream 113485 387841 ~ 390386 (+)
G678508 NA non-coding upstream 176893 322749 ~ 326978 (+)
G678632 NA non-coding downstream 126700 677874 ~ 685043 (+)
G678703 NA non-coding downstream 147501 698675 ~ 699054 (+)
G678654 NA non-coding downstream 163260 714434 ~ 714846 (+)
G678712 NA non-coding downstream 170949 722123 ~ 722457 (+)
G678640 NA non-coding downstream 196091 747265 ~ 777004 (+)
G678440 NA other upstream 352219 147934 ~ 151652 (+)
G678751 NA other downstream 508669 1059843 ~ 1066091 (+)
G678637 NA other downstream 598377 1149551 ~ 1155672 (+)
G678946 NA other downstream 967179 1518353 ~ 1612547 (+)
G679076 NA other downstream 1243996 1795170 ~ 1799433 (+)
G679324 NA other downstream 1837693 2388867 ~ 2397360 (+)

Expression


Co-expression Network