CI01180000_00765917_00776252


Basic Information

Item Value
gene id CI01180000_00765917_00776252
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 765797 ~ 776911 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_00765917_00776252.mRNA
GGTTTAAATGATTGCTACCAGATTACTACTTTTGTGCAGCCATTCGTACTTTTTTTTAAAAAATTTTATTTTATTTCTCTCCTCAGAAGACGTCCTTGATTTAATGGGTCCAATCATCGGGATGTCGCCGGATAAGAAAGCAGAATCCCCGGGCGTGCTGGCGGAGCGGACGGACCTGCGCGGGGTTTGTGGGACGTTGCCCGAGGCCGAGTGCGCCGCCAGCCCTCTCGCCACCAGCTTGGACCGCAGCTCCAGCTCAGGAGACGAAGAACTCACCAACCTCAACTGGCTCCACGAGAACCTGCTCCAGAACTTCACGCTGGGAGGCCCCGAGGCCCAGTCCAGGCCCAGTCCGCTCTTCGATATCGAGGGCAACCACGGCAGCTCCGTCATCTCCTCGGCGGCATCCCATGGCGGAGAGTCTGTAAAGTCAAAGCCGCCGTTTTCCTTCTCTCTGCTCATATACATGGCCATCGAACAGTCGCCCAGCAAGTCGCTGCCGGTGAAGGACATCTACGGCTGGATTCTGGAGCACTTTCCCTACTTCTCCAGCGCCCCTACTGGCTGGAAGAACTCGGTGCGGCACAACCTCTCCCTCAACAAGTGCTTCCGCAAGGTGGAGAGGAGCCTTGGGAAGGACTGCTCTCTGAAAGAGTCTGACATTGATGCCGCGACTGCTATGATGCTGTTAAACTCTGCCCCCGGACACCACAGTGACCCCGGTGACCCGGACAGCCCTATAGACCTCTCACGCCCGGACTCGGTCCTAGTGAGCAGCGACCCAAAGCAGGACCACAACTACAGCAGCTCCTCCTTCCAGCGCTGCTCGTCTCGCTCTTCCTCGTCCTCCTCGTCCTCACTGTCATCCCTAGACGAGGCAGGCTGCGACTCCGGCCAGGGCCGCCGCGCCGGCAGCGAGGGTTTCCACAGCGACGAGGACTCGGAGGAGGAGAGGAACTCACGCCTGCCCTCGCTTCCCGTTCGCCGCCCGCTCACCGTCAAGTGCCCTCTTCCGGGTAAACGGGCCCGCCACGAGTCCAAACCGGAACTGGACGAGGAGTTGAAAGAGGCGGCCGGGTCTCTCTTACACCTGGCCGGGATCCGTTCCGGCCTGGATCTCTCTAAGCGAACGGCCAAGAGTAAAAAACTGGAAAAGCACCGAAAATGAAGCCGAAAAATCCCTAGACTGTGTATCAGTGACTGTGCCTCCCATCATGGAAACCCTCTCTCTTGTTTTGTTTTTTTTTATCTACATTTTTCATTTTATATGAGAGATTTTCCCTCCCTGACTCAAACTACGGCAATAGCGACTTTCACGCGGAGGTGAACGAAGCCATACTGAGACTTTGGAGCGCGAATGGAGCCGTTCAGGATTTCTCTCAGTGAAGTTGGATAGGGAGAGACTGATGTGTTTTCTCTTAAACGTTTGCATGCTTCCTCTTTAGGTGAGTGTCCTACTCTTCCAAGTGAATCTGTGGCGTTTCTACAGAGAACGAGTGCATGTCCGTGTTGTTCGAAGCACTAACCTCTCCCGTCGTCCACTTTGTGAACGCGCTCCAGAAAATGGAAAACGAGAATTACGTCAAGAGTTCCCAGTTTTTTGTTTTGTTTTTGAAGTACACAACAAAGAAATGCAATAATTATCATCAGGCGGCTGGCGTTAAGTTCTTTCTCTTCATCAGAGGCACTGGATATCATTGCGGATGGCATGCAGAAAGGATTTATGGATAACGGATGACTTTTTTTCTCCATCAGTCGTGATATTTATGGGGTAAATCTCATGAAAATACATCAGGGTCACACTTCACTCCAGAATCAAAAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_00765917_00776252.mRNA True 1826 mRNA 0.53 4 765797 776911

Neighbor

gene id symbol gene type direction distance location
CI01180000_00737754_00743866 NA coding upstream 21586 735310 ~ 744211 (+)
CI01180000_00661446_00671602 MSH6 coding upstream 93609 661109 ~ 672188 (+)
CI01180000_00427700_00437883 NA coding upstream 327331 427650 ~ 438466 (+)
CI01180000_00368639_00375465 ZC3H6 coding upstream 389550 368639 ~ 376247 (+)
CI01180000_00361420_00364335 NA coding upstream 400671 361420 ~ 365126 (+)
CI01180000_00812535_00858607 NA coding downstream 34946 811857 ~ 859005 (+)
CI01180000_00862066_00867985 NA coding downstream 83835 860746 ~ 868112 (+)
CI01180000_00947514_00949868 NA coding downstream 169510 946421 ~ 950906 (+)
CI01180000_00955725_01050852 SIPA1L2 coding downstream 178011 954922 ~ 1051826 (+)
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding downstream 419875 1196786 ~ 1224915 (+)
G678712 NA non-coding upstream 43340 722123 ~ 722457 (+)
G678654 NA non-coding upstream 50951 714434 ~ 714846 (+)
G678703 NA non-coding upstream 66743 698675 ~ 699054 (+)
G678632 NA non-coding upstream 80754 677874 ~ 685043 (+)
G678608 NA non-coding upstream 232149 533150 ~ 533648 (+)
G678633 NA non-coding downstream 696 777607 ~ 779619 (+)
G678629 NA non-coding downstream 2883 779794 ~ 780590 (+)
G678717 NA non-coding downstream 7004 783915 ~ 784202 (+)
G678720 NA non-coding downstream 9450 786361 ~ 786662 (+)
G678653 NA non-coding downstream 21778 798689 ~ 798938 (+)
G678440 NA other upstream 614145 147934 ~ 151652 (+)
G678751 NA other downstream 282932 1059843 ~ 1066091 (+)
G678637 NA other downstream 372640 1149551 ~ 1155672 (+)
G678946 NA other downstream 741442 1518353 ~ 1612547 (+)
G679076 NA other downstream 1018259 1795170 ~ 1799433 (+)
G679324 NA other downstream 1611956 2388867 ~ 2397360 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006261 FOXN2 coding NC_007124.7 CM002897.2 48482256 ~ 48551810 (+)