Gene
RNA
| Item | Value |
|---|---|
| gene id | G684165 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 7879180 ~ 7879409 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU805446 | True | 230 | lncRNA | 0.33 | 1 | 7879180 | 7879409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_07713320_07727939 | CAPN2, CAPN2A | coding | downstream | 150980 | 7712374 ~ 7728200 (-) |
| CI01180000_07696310_07709917 | CAPN1A, CAPN11 | coding | downstream | 169263 | 7696310 ~ 7709917 (-) |
| CI01180000_07691853_07694359 | NA | coding | downstream | 184815 | 7691756 ~ 7694365 (-) |
| CI01180000_07664300_07675535 | LRRFIP2 | coding | downstream | 203645 | 7663854 ~ 7675535 (-) |
| CI01180000_07634809_07642632 | NA | coding | downstream | 236161 | 7633985 ~ 7643019 (-) |
| CI01180000_07935855_07937319 | NA | coding | upstream | 56304 | 7935713 ~ 7937577 (-) |
| CI01180000_07958912_07969452 | NA | coding | upstream | 79330 | 7958739 ~ 7969452 (-) |
| CI01180000_07995410_08004464 | IF3EI, EIF3L, EIF3S6IP | coding | upstream | 115778 | 7995187 ~ 8004777 (-) |
| CI01180000_08007547_08008834 | NA | coding | upstream | 127326 | 8006735 ~ 8008856 (-) |
| CI01180000_08123227_08149912 | ABLIM1A | coding | upstream | 243691 | 8123100 ~ 8149912 (-) |
| G684163 | NA | non-coding | downstream | 6647 | 7872224 ~ 7872533 (-) |
| G684159 | NA | non-coding | downstream | 8449 | 7870441 ~ 7870731 (-) |
| G684158 | NA | non-coding | downstream | 8878 | 7869391 ~ 7870302 (-) |
| G684152 | NA | non-coding | downstream | 39367 | 7839608 ~ 7839813 (-) |
| G684150 | NA | non-coding | downstream | 44517 | 7834373 ~ 7834663 (-) |
| G684168 | NA | non-coding | upstream | 7324 | 7886733 ~ 7886965 (-) |
| G684171 | NA | non-coding | upstream | 11012 | 7890421 ~ 7890644 (-) |
| G684176 | NA | non-coding | upstream | 18478 | 7897887 ~ 7898091 (-) |
| G684182 | NA | non-coding | upstream | 31420 | 7910761 ~ 7911208 (-) |
| G684183 | NA | non-coding | upstream | 32154 | 7911563 ~ 7911775 (-) |
| G684080 | NA | other | downstream | 296377 | 7579404 ~ 7582803 (-) |
| G684071 | NA | other | downstream | 353526 | 7506890 ~ 7525654 (-) |
| G684018 | NA | other | downstream | 466048 | 7403147 ~ 7413132 (-) |
| G683673 | NA | other | downstream | 1116336 | 6762075 ~ 6762844 (-) |
| G683294 | NA | other | downstream | 2123654 | 5751044 ~ 5755526 (-) |
| G684493 | NA | other | upstream | 843284 | 8722693 ~ 8723867 (-) |
| G684929 | NA | other | upstream | 2019015 | 9895316 ~ 9901388 (-) |
| G686052 | NA | other | upstream | 3462207 | 11341616 ~ 11343496 (-) |
