Gene
RNA
| Item | Value |
|---|---|
| gene id | G684171 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 7890421 ~ 7890644 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU805452 | True | 224 | lncRNA | 0.35 | 1 | 7890421 | 7890644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_07713320_07727939 | CAPN2, CAPN2A | coding | downstream | 162221 | 7712374 ~ 7728200 (-) |
| CI01180000_07696310_07709917 | CAPN1A, CAPN11 | coding | downstream | 180504 | 7696310 ~ 7709917 (-) |
| CI01180000_07691853_07694359 | NA | coding | downstream | 196056 | 7691756 ~ 7694365 (-) |
| CI01180000_07664300_07675535 | LRRFIP2 | coding | downstream | 214886 | 7663854 ~ 7675535 (-) |
| CI01180000_07634809_07642632 | NA | coding | downstream | 247402 | 7633985 ~ 7643019 (-) |
| CI01180000_07935855_07937319 | NA | coding | upstream | 45069 | 7935713 ~ 7937577 (-) |
| CI01180000_07958912_07969452 | NA | coding | upstream | 68095 | 7958739 ~ 7969452 (-) |
| CI01180000_07995410_08004464 | IF3EI, EIF3L, EIF3S6IP | coding | upstream | 104543 | 7995187 ~ 8004777 (-) |
| CI01180000_08007547_08008834 | NA | coding | upstream | 116091 | 8006735 ~ 8008856 (-) |
| CI01180000_08123227_08149912 | ABLIM1A | coding | upstream | 232456 | 8123100 ~ 8149912 (-) |
| G684168 | NA | non-coding | downstream | 3456 | 7886733 ~ 7886965 (-) |
| G684165 | NA | non-coding | downstream | 11012 | 7879180 ~ 7879409 (-) |
| G684163 | NA | non-coding | downstream | 17888 | 7872224 ~ 7872533 (-) |
| G684159 | NA | non-coding | downstream | 19690 | 7870441 ~ 7870731 (-) |
| G684158 | NA | non-coding | downstream | 20119 | 7869391 ~ 7870302 (-) |
| G684176 | NA | non-coding | upstream | 7243 | 7897887 ~ 7898091 (-) |
| G684182 | NA | non-coding | upstream | 20185 | 7910761 ~ 7911208 (-) |
| G684183 | NA | non-coding | upstream | 20919 | 7911563 ~ 7911775 (-) |
| G684184 | NA | non-coding | upstream | 21565 | 7912209 ~ 7912499 (-) |
| G684185 | NA | non-coding | upstream | 23413 | 7914057 ~ 7914354 (-) |
| G684080 | NA | other | downstream | 307618 | 7579404 ~ 7582803 (-) |
| G684071 | NA | other | downstream | 364767 | 7506890 ~ 7525654 (-) |
| G684018 | NA | other | downstream | 477289 | 7403147 ~ 7413132 (-) |
| G683673 | NA | other | downstream | 1127577 | 6762075 ~ 6762844 (-) |
| G683294 | NA | other | downstream | 2134895 | 5751044 ~ 5755526 (-) |
| G684493 | NA | other | upstream | 832049 | 8722693 ~ 8723867 (-) |
| G684929 | NA | other | upstream | 2007780 | 9895316 ~ 9901388 (-) |
| G686052 | NA | other | upstream | 3450972 | 11341616 ~ 11343496 (-) |
