G682061


Basic Information

Item Value
gene id G682061
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7894485 ~ 7894745 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU803090
TAGTGCAGCAGGGGTGTCCATATCCTGTCATGTGATCTAGAGCTACACTATATTGACAAAAGTCATTAAATTCAGGTGTTCCAATCAGTTCCATGGCCACAGGTGTATAAAATCAAGCACCTAGGCATGCAAACTGCTTCTACAAACATTTGTGAAAGAATGGGTCGCTCTCAGGAGCTCAATGAATTAAAGCGTGGTACCGTGATAGGTTGCCACCTGTGCAATAAGTCCATTCGCAAATTTCCTCAATACTAAATATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU803090 True 261 lncRNA 0.42 1 7894485 7894745

Neighbor

gene id symbol gene type direction distance location
CI01180000_07802968_07887251 CDH23 coding upstream 7234 7802968 ~ 7887251 (+)
CI01180000_07694615_07695428 MRPL14 coding upstream 198939 7694529 ~ 7695667 (+)
CI01180000_07655737_07662839 MLH1 coding upstream 231553 7654823 ~ 7662932 (+)
CI01180000_07630010_07630436 NA coding upstream 263569 7629585 ~ 7631154 (+)
CI01180000_07558791_07591349 CPEB3 coding upstream 302593 7558791 ~ 7591892 (+)
CI01180000_07939719_07956224 CDH23 coding downstream 44447 7939192 ~ 7957335 (+)
CI01180000_08012978_08021101 SMOC2 coding downstream 118233 8012978 ~ 8021401 (+)
CI01180000_08028837_08040090 SMOC2 coding downstream 134092 8028837 ~ 8040604 (+)
CI01180000_08082738_08089656 DACT2 coding downstream 187993 8082738 ~ 8090111 (+)
CI01180000_08188493_08197943 ZFYVE21 coding downstream 293748 8188493 ~ 8198044 (+)
G682059 NA non-coding upstream 1510 7892768 ~ 7892975 (+)
G682056 NA non-coding upstream 4113 7890069 ~ 7890372 (+)
G682053 NA non-coding upstream 9383 7884889 ~ 7885102 (+)
G682051 NA non-coding upstream 12346 7881841 ~ 7882139 (+)
G682050 NA non-coding upstream 21254 7872956 ~ 7873231 (+)
G682068 NA non-coding downstream 16016 7910761 ~ 7911129 (+)
G681820 NA non-coding downstream 28248 7922993 ~ 7995483 (+)
G682107 NA non-coding downstream 152823 8047568 ~ 8047837 (+)
G682108 NA non-coding downstream 155517 8050262 ~ 8050518 (+)
G682111 NA non-coding downstream 162700 8057445 ~ 8057678 (+)
CI01180000_07403482_07412752 HELLS other upstream 424880 7403482 ~ 7413190 (+)
G681667 NA other upstream 1234939 6655846 ~ 6659546 (+)
G681686 NA other upstream 1259496 6632908 ~ 6634989 (+)
G681592 NA other upstream 1415486 6471995 ~ 6478999 (+)
G682232 NA other downstream 473440 8368185 ~ 8368935 (+)
CI01180000_09036547_09038313 MGST3B other downstream 1141672 9035736 ~ 9038892 (+)
G685188 NA other downstream 2925241 10819986 ~ 10866176 (+)
G685443 NA other downstream 3238987 11133732 ~ 11141722 (+)
CI01180000_11153499_11155781 NA other downstream 3258544 11153183 ~ 11157626 (+)

Expression


Co-expression Network