G684735


Basic Information

Item Value
gene id G684735
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 9633523 ~ 9634496 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU806104
ACCTTAGATTACACATTTTTCATTTTTTTCTCAAATTAGGGTAATGCAAAAATGAGTACACCCCACAACAAAAACTACTACATTTAGTACTTTGTATGGCCTCCATGATTTGTAATGACAGCACCAAGTCTTCTAGGCATGGAATGAAAAAGTTGGCGACATTTTGCAACATCTATCTTTTTCCATTCTTCAAGAATGACCTCTTTTAGAGACTGGATGCTGGATGGAGAGTGATGCTCAACTTGTCTCTTCAGAATTCCCCATAGGTGTTCGATTGGATTCAGATCAGGAGCCGATGAATCACTTTCACCCTGTTCTTCTTCAGAAATCCAACAGTGGCCTTAGATGTGTGTTTAGGATCATTGTCATGTTGGAAAAGTGCACGACGACCTTCTCATCAGAAGACGCTCCTGTCGAGGTGTTAACTTCCGTGGATGACCTGGACATCTCTGTGAGATGGTTGCAGTTCCATCTTTTTTAATTTTTGTACCACTTTTGCTACAATATTCTGACTGATAAGTAAAGATTTGCTGATCTTCTTGTAGCCTTCACCTTTCTGGTGTAAAGAAATTATTTTCTTTCTCAGGTCTTGTGACATTTCTCTTCCATGTGGTGCCATTGCTGACAGCATGAAATGGGAAGGGGTTTTAACACCCTTTTATAGTCAACTGTCTGCTGGACACCTGTGTAATGAATAATTAGTCTCACCTGTGTTTGAATTCTTGTTAAATTAGACATTTGTAGTCTAAAATGTAGCTTTGCTCCAGAGACTTTCAGTGGGGTGTACTCATTTTTGCATCACCCTAATTTGAGTAAAATTGAAAATTTTGTTCTCCAAGTTATATTATTAACCTTACTTT
>TU806105
CCCCCTTTGAAAAGTAACATTTCAAACAATATCTCAATGAACACAAAAACAATTTCCAAAATGTTGACAAGACTAAGTTTAATATAACATCTGTTTAAGTAAGGTTAATAATACACCTTAGATTACACATTTTTCATTTTTTTCTCAAATTAGGGTAATGCAAAAATGAGTACACCCCACAACAAAAACTACTACATTTAGTACTTTGTATGGCCTCCATGATTTGTAATGACAGCACCAAGTCTTCTAGGCATGGAATGAAAAAGTTGGCGACATTTTGCAACATCTATCTTTTTCCATTCTTCAAGAATGACCTCTTTTAGAGACTGGATGCTGGATGGAGAGTGATGCTCAACTTGTCTCTTCAGAATTCCCCATAGGTGTTCGATTGGATTCAGATCAGGAGCCGATGAATCACTTTCACCCTGTTCTTCTTCAGAAATCCAACAGTGGCCTTAGATGTGTGTTTAGGATCATTGTCATGTTGGAAAAGTGCACGACGACCTTCTCATCAGAAGACGCTCCTGTCGAGGTGTTAACTTCCGTGGATGACCTGGACATCTCTGTGAGATGGTTGCAGTTCCATCTTTTTTAATTTTTGTACCACTTTTGCTACAATATTCTGACTGATAAGTAAAGATTTGCTGATCTTCTTGTAGCCTTCACCTTTCTGGTGTAAAGAAATTATTTTCTTTCTCAGGTCTTGTGACATTTCTCTTCCATGTGGTGCCATTGCTGACAGCATGAAATGGGAAGGGGTTTTAACACCCTTTTATAGTCAACTGTCTGCTGGACACCTGTGTAATGAATAATTAGTCTCACCTGTGTTTGAATTCTTGTTAAATTAGACATTTGTAGTCTAAAATGTAGCTTTGCTCCAGAGACTTTCAGTGGGGTGTACTCATTTTTGCATCACCCTAATTTGAGTAAAATTGAAAATTTTGTTCTCCAAGTTATATTATTAACCTTACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU806104 False 860 lncRNA 0.38 1 9633523 9634382
TU806105 True 974 lncRNA 0.37 1 9633523 9634496

Neighbor

gene id symbol gene type direction distance location
CI01180000_09568657_09570949 NA coding downstream 62395 9567425 ~ 9571128 (-)
CI01180000_09515348_09519388 PREPL coding downstream 114135 9514397 ~ 9519388 (-)
CI01180000_09389794_09446057 NA coding downstream 187466 9389794 ~ 9446057 (-)
CI01180000_09367707_09378410 ABCG5 coding downstream 255060 9367595 ~ 9378463 (-)
CI01180000_09361267_09366764 NA coding downstream 266759 9360894 ~ 9366764 (-)
CI01180000_09712937_09715071 SIX2A, SIX2 coding upstream 78235 9712381 ~ 9715548 (-)
CI01180000_09797406_09801305 NA coding upstream 162597 9797093 ~ 9801321 (-)
CI01180000_09862542_09863408 NA coding upstream 227640 9862136 ~ 9863760 (-)
CI01180000_09880982_09883947 PRDX3 coding upstream 246314 9880810 ~ 9884190 (-)
CI01180000_09889952_09893572 FAM45A coding upstream 254946 9889442 ~ 9893572 (-)
G684737 NA non-coding downstream 108 9633130 ~ 9633415 (-)
G684738 NA non-coding downstream 524 9632645 ~ 9632999 (-)
G684717 NA non-coding downstream 30241 9603032 ~ 9603282 (-)
G684643 NA non-coding downstream 183839 9449087 ~ 9449684 (-)
G684414 NA non-coding downstream 373868 9247020 ~ 9259655 (-)
G684739 NA non-coding upstream 53 9634549 ~ 9634930 (-)
G684741 NA non-coding upstream 1416 9635912 ~ 9636116 (-)
G684746 NA non-coding upstream 6162 9640658 ~ 9640879 (-)
G684751 NA non-coding upstream 15431 9649927 ~ 9650144 (-)
G684752 NA non-coding upstream 16360 9650856 ~ 9651197 (-)
G684493 NA other downstream 909656 8722693 ~ 8723867 (-)
G684182 NA other downstream 1722315 7910761 ~ 7911208 (-)
G684080 NA other downstream 2050720 7579404 ~ 7582803 (-)
G684071 NA other downstream 2107869 7506890 ~ 7525654 (-)
G684018 NA other downstream 2220391 7403147 ~ 7413132 (-)
G684929 NA other upstream 263928 9895316 ~ 9901388 (-)
G686052 NA other upstream 1707120 11341616 ~ 11343496 (-)

Expression


Co-expression Network