XLOC_014691


Basic Information

Item Value
gene id XLOC_014691
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 18743977 ~ 18753193 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030194
CTGGAGTACTTCAAGACCTTTTTATGCACAGGACCGTTTTAGGAGCTGCAAATAGGATGGGTGGAGGTAACAGAGAATATGGCTTTGACACATCAAGCTGTTTAAAGCTCTTTGAAATAAATAGTTCCATATTAGTCACTAAGGAAATGTTGTCTCCAAGATTTTGAgttaaaatggaaaataaaagtCATGGAAAATTGTTGTTGATGAGCTATAAAGCTgcttcaagtgtttttttttccacaatgattCACAGTTTTGTAGTGGCGTTCATTACCAATACCACCTAATTGCATTTAGCAGTATGGATGACTAAAGGTAAACAATTACAACAACGTGGTTGTACAAATTTATCTTTGGATCTTCTGAAGAATTCCTTTTTACAAAACCAATAATGGTATTTCTCACTATATCTCACATACTGTATATCATCTAAAACTGATAAAATGTTTAATTCTGAATATTTTAGCAATTCTTTTAGCAATTGATGAACTAATAAATTGACACTGGACAACCATATTTCATGGAAATAACAGTATAACACTTAAAATAAAGACGAATGGATTAAAAATCACATTTCCACTTTGATAGCATGCACTAAAATATGTGGAAGAGCTGTAGATAACACAGGAATGCTTTTTGAATGTGCTGCAGACAGATTTCAAGCAAGTCACCACTTGCTAAAGCCTGAAGctgaaaataatcaaacaaatcaGGCAGTACATTTATGATCAGTTTTCCACTAATGAAATTTGTGTTGGAAAAGTGAGCCCAAatttctcattatttactcaaaagattatgaaaatgtgtatatttttaagGCTTCTTCATGATTGTGGTATTGAGAAGGCAAGCATTTTAGCCTTAATCTATCGTTTACAGACCTGCATGTGACCtgcatgtttaattaattaattgaaaaacGATGTAAAATAACAATTACATGACACAATTTTTTCTCAAGTGCATAATGCGTTCTCTAACCCTTGAATGGGCActctaagatttttttaaaaaacaatttctgTATGATTGTTTTCCTGACACCACTCTATCAACttttcagatttttgttttaatgataacAGAACAGTTACAATGCCTGTTCAATTAATGTAGCAAACGTTTTATTAAGAGTACTGGCTTTGCCTGTTATCCCTTAGAAGCCAACAAAACTTAATaagctacaaaataaaaaagtgctgCTTATTTGTTGTACTTGtttttattgcag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030194 True 1237 lncRNA 0.32 2 18743977 18753193

Neighbor

gene id symbol gene type direction distance location
XLOC_014690 st3gal1l3 coding downstream 61467 18657029 ~ 18682510 (-)
XLOC_014689 rps18 coding downstream 116952 18617608 ~ 18627025 (-)
XLOC_014688 FP085400.1 coding downstream 146651 18596786 ~ 18597326 (-)
XLOC_014686 p3h4 coding downstream 251420 18423378 ~ 18492557 (-)
XLOC_014687 BX927404.1 coding downstream 258096 18484706 ~ 18485881 (-)
XLOC_014693 NA coding upstream 78875 18832068 ~ 18844413 (-)
XLOC_014694 FP074902.5 coding upstream 85218 18838411 ~ 18838541 (-)
XLOC_014695 FP074902.3 coding upstream 88220 18841413 ~ 18841543 (-)
XLOC_014696 ppt2 coding upstream 93730 18846923 ~ 18855717 (-)
XLOC_014697 NA coding upstream 106863 18860056 ~ 18863204 (-)
XLOC_014711 CR382300.3 misc upstream 975497 19728690 ~ 19728755 (-)
XLOC_014684 BX649471.2 non-coding downstream 379012 18363317 ~ 18364965 (-)
XLOC_014683 BX649471.3 non-coding downstream 428656 18314328 ~ 18315321 (-)
XLOC_014680 NA non-coding downstream 604083 18137714 ~ 18139894 (-)
XLOC_014698 FP074902.1 non-coding upstream 125809 18879002 ~ 18880124 (-)

Expression


Co-expression Network