XLOC_014696 (ppt2)


Basic Information

Item Value
gene id XLOC_014696
gene name ppt2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 18846923 ~ 18855717 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029039
ATGAAGGGTGCGTGTGTGTGGACGCtggtgtctgtttgtgtgttttgtgtgtgtgttgcgtaTAAACCGGTGATCGTCGTTCACGGGCTCTTCGATAGCTCAGCTGACTTCGTCCACCTACACCGATTCATCAACCTGTCTCACCCGGGCACTAATGTCACTGTCCTGGACCTATTTGACCGCAGTGCCAGCCTGCAGCCCCTCTGGAAGCAGGTGGAGGGCTTCACAGAAGCCATATATCCCATCATGCAGAATGCAGCTGATGGTGTCCACTTGATCTGCTACTCACAAGGTGGCTTGGTATGTCGAGGAATTCTGTCCACTCTCCCAGACCATAATGTACACTCTTTTATATCTCTGTCTGCTCCACAGGCAGGACAGTATGGAGACACAGACTATTTGAAGTACCTGTTCCCTCAGTTTGTCAAATCCAACTTGTTTCATGTATGCTATACTGCAGTGGGCcagaaaatatcaatctgtaactACTGGAATGacCCTCATCACAGAGACATGTACATCAACAGCAGTGACTATCTGGCCTTACTAAACAATGAAAGACCAAATCCCAACTCTACTgCTTGGAAACAAAACTTTCTGCGTATTAAGAAGCTAGTACTGATTGGCGGCCCTGATGATGGGGTAATCACACCATGGCAGTCAAGTCAGTTTGGTTTCTATGATGATAATGAGACTGTCGTTGAGATGAAAAACCAGAAAGTGTTTCTGATGGACTTGTTTGGACTGAAGACGTTGTCTGCTCGAGGGGATCTGGCTCTGTGTTCAGTGGAAGGCGTTGCGCATATCTTCTGGCACTCCAATGAAACGtattttagcGCATTGCATCAGAACAGACATTTCTGTTACAGTGATTCTGCATCCATGGAAAACCCATAGTAGAGATGCAACATGTATTGTgattacatgtttacatttataaaagtaaACTAAACATAATGAACAGCCATCAGTGCCTGAGGGAAACATTCTTCATTTTACAAAAGGAACTGGATCTTAGCTGCTGTTTTACTTTgcttttgatgtttttatttctataatgTTTTATGTGGATTGTGCACTGCAGTAATATTTATGCCTTTCATTCAAAGGGACATGTTTTGTTCTGTCTTAAATCCAAGTACTGTGTTAGACTGAACGTAGAGACAGTGCAATGAGAAAGAAGGGAGATTACAATGGGCAAAAGGATTAGATTCTAAATGTGTTGCATTTGTTGTATATTACCTCTCAACCTTAGGCCCAACATTGTTTGTGTACCATAAAGGGATTTGTCTTTGAACAGTTAAACCTTTACGTTTTGTTACTTTGTTTAAAGCAAAGCTTTGTCTAACAAGTTATTCACATAGTTTTTTACATTTCTGCTATAAGAGTTTGATATTTTAAGCacaatataatttaaatgaatttagaTTATGGTAAATCTATATAACTTCTAAGGCTAATGCGTGCTGCACAAAACCCATTCTTCCTTGGTTCTTGATATTGTACACTTATTTGTTTTAACTGTTTCATCAAAACACTAATAGTGTTAACGAATAGTTTCTTGTAAATACTGTGTTGGAAGTATTAAATATGTCAGTACATTCAGCTAAAACTTACTTTGTTTGGAACATTATACTCATTAAACATTGTCAGTTGGAAATGTTGTCAATGACTTAAGCTGCAtgcataattattgtttttagttAGCTTTCAGAATAACATTTTGATTTCAATGTGAAGAATGCTATTTTTTCAATGTTGGTAATGCaaatctttaataaaatattttttcaaataaaaccaTGTTTCAGAGGGTAGTGAGAGCttcaatgaatatatatatatatatatatatatatatatatatatata
>TCONS_00029040
GCGATGCACTGGCCGGATGCTGCGCAAGCAGATGCATATAGACACATATTTGATAGACGTAGTCAAACGAATTGTGCAGAAACTGAAAGTTTAACCTTCACATGGATTTGCTTAagacatttattattttgatttttattGTAGCGTTTTAGACGTTTCTTACCTATATAATACTTTGTATTTTATCTTTGTGTTATTGTTAGTATGAAGGGTGCGTGTGTGTGGACGCtggtgtctgtttgtgtgttttgtgtgtgtgttgcgtaTAAACCGGTGATCGTCGTTCACGGGCTCTTCGATAGCTCAGCTGACTTCGTCCACCTACACCGATTCATCAACCTGTCTCACCCGGGCACTAATGTCACTGTCCTGGACCTATTTGACCGCAGTGCCAGCCTGCAGCCCCTCTGGAAGCAGGTGGAGGGCTTCACAGAAGCCATATATCCCATCATGCAGAATGCAGCTGATGGTGTCCACTTGATCTGCTACTCACAAGGTGGCTTGGTATGTCGAGGAATTCTGTCCACTCTCCCAGACCATAATGTACACTCTTTTATATCTCTGTCTGCTCCACAGGCAGGACAGTATGGAGACACAGACTATTTGAAGTACCTGTTCCCTCAGTTTGTCAAATCCAACTTGTTTCATGTATGCTATACTGCAGTGGGCcagaaaatatcaatctgtaactACTGGAATGacCCTCATCACAGAGACATGTACATCAACAGCAGTGACTATCTGGCCTTACTAAACAATGAAAGACCAAATCCCAACTCTACTgCTTGGAAACAAAACTTTCTGCGTATTAAGAAGCTAGTACTGATTGGCGGCCCTGATGATGGGGTAATCACACCATGGCAGTCAAGTCAGTTTGGTTTCTATGATGATAATGAGACTGTCGTTGAGATGAAAAACCAGAAAGTGTTTCTGATGGACTTGTTTGGACTGAAGACGTTGTCTGCTCGAGGGGATCTGGCTCTGTGTTCAGTGGAAGGCGTTGCGCATATCTTCTGGCACTCCAATGAAACGGTGTATAAAACCTGCATTGAAAAATGGCTTACATAGATTCTGACACAGTACatgtctttttaattttttaactcaTTCATACAAATGTTTGcacttttttaacagtattttagcGCATTGCATCAGAACAGACATTTCTGTTACAGTGATTCTGCATCCATGGAAAACCCATAGTAGAGATGCAACATGTATTGTgattacatgtttacatttataaaagtaaACTAAACATAATGAACAGCCATCAGTGCCTGAGGGAAACATTCTTCATTTTACAAAAGGAACTGGATCTTAGCTGCTGTTTTACTTTgcttttgatgtttttatttctataatgTTTTATGTGGATTGTGCACTGCAGTAATATTTATGCCTTTCATTCAAAGGGACATGTTTTGTTCTGTCTTAAATCCAAGTACTGTGTTAGACTGAACGTAGAGACAGTGCAATGAGAAAGAAGGGAGATTACAATGGGCAAAAGGATTAGATTCTAAATGTGTTGCATTTGTTGTATATTACCTCTCAACCTTAGGCCCAACATTGTTTGTGTACCATAAAGGGATTTGTCTTTGAACAGTTAAACCTTTACGTTTTGTTACTTTGTTTAAAGCAAAGCTTTGTCTAACAAGTTATTCACATAGTTTTTTA
>TCONS_00029041
gtgtgttttgtgtgtgtgttgcgtaTAAACCGGTGATCGTCGTTCACGGGCTCTTCGATAGCTCAGCTGACTTCGTCCACCTACACCGATTCATCAACCTGTGCCAGCCTGCAGCCCCTCTGGAAGCAGGTGGAGGGCTTCACAGAAGCCATATATCCCATCATGCAGAATGCAGCTGATGGTGTCCACTTGATCTGCTACTCACAAGGTGGCTTGGTATGTCGAGGAATTCTGTCCACTCTCCCAGACCATAATGTACACTCTTTTATATCTCTGTCTGCTCCACAGGCAGGACAGTATGGAGACACAGACTATTTGAAGTACCTGTTCCC

Function

symbol description
ppt2 Enables palmitoyl hydrolase activity. Predicted to be involved in fatty-acyl-CoA biosynthetic process. Located in intracellular membrane-bounded organelle.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104542

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029039 False 1872 mRNA 0.38 9 18846923 18855513
TCONS_00029040 False 1680 mRNA 0.40 8 18847424 18855717
TCONS_00029041 True 332 nonsense_mediated_decay 0.50 4 18854057 18855476

Neighbor

gene id symbol gene type direction distance location
XLOC_014693 NA coding downstream 2510 18832068 ~ 18844413 (-)
XLOC_014695 FP074902.3 coding downstream 5380 18841413 ~ 18841543 (-)
XLOC_014694 FP074902.5 coding downstream 8382 18838411 ~ 18838541 (-)
XLOC_014691 NA coding downstream 93730 18743977 ~ 18753193 (-)
XLOC_014692 NA coding downstream 96605 18749605 ~ 18750318 (-)
XLOC_014697 NA coding upstream 4339 18860056 ~ 18863204 (-)
XLOC_014698 FP074902.1 coding upstream 23285 18879002 ~ 18880124 (-)
XLOC_014699 FP067442.1 coding upstream 87009 18942726 ~ 18953206 (-)
XLOC_014700 dync1li1 coding upstream 134194 18989911 ~ 19026028 (-)
XLOC_014701 NA coding upstream 420096 19275813 ~ 19339337 (-)
XLOC_014711 CR382300.3 misc upstream 872973 19728690 ~ 19728755 (-)
XLOC_014704 NA non-coding upstream 603334 19459051 ~ 19461297 (-)

Expression


Co-expression Network