XLOC_014700 (dync1li1)


Basic Information

Item Value
gene id XLOC_014700
gene name dync1li1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 18989911 ~ 19026028 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029045
CTTTCAGGGGTGTCACTCAAGCCTGCGAAGATGGCGACGACGGGCAGAAATACACTCCTATCGGTTAGCACAAATGTAAATAACAGCACTTCCGAAAGCCAAAACCCCGAGGAGGAGGATGGACAGAATTTATGGTCATCGATACTGAGTGAGGTGTCGACGCGCTCACGATCAAAATTGCCGTCAGGAAAAAATGTGGTGGTCATGGGTGAAGTAGGGTCTGGTAAGACCACCCTGGTTGCGAAACTCCAAGGTGTAGAAGAGTACATGAAGGGACGAGGCTTAGAGTACCTGTATTTCAATGTTCACGATGATGATATTGATGATCAATCACGGTGTAACGCATGGGTGCTAGATGGGGATTTGTACCACAAAGGTCTGCAGAAATTTGCTATATCGTTGGAAAACCTGGAGGACTCGCTGATTCTGTTTGTAGTGGATTTGTCCCGGCCATGGCTGGCCCTCGACTCACTGCAGAAATGGGGCAGTGTGGTGAGGGATTTTGTGGACAAGCTCAGAGTTCCTCCTGAAACCATGCGAGAACTGGAGCACAGATTGACAAAGCAGTTCCAGGAATATGTGGAACCAGGAAGTGACTTGGACGCTGTGCCCCAGAGGAGGAATCCTGAGTCAGATGAAGAGAGTGTCCTGTTGCCGCTGGgagaaaacacactcacacacaacctAGGCCTGCCTATAGTGGTGGTCTGCACCAAGTGTGATGCAATCAGCACTTTGGAGAAGGAGCACGATTATAAGGACGAGCACTTAGACTTCATCCAGTCTCACATTCGACGCTTCTGCTTGCAGTatggagcagcacTACTCTACACATCCATGAAGGAGAACAAGAATCTAGACTTGTTATATAAATACCTCGTTCACAGGTTATATGGCTTTCCGTTCAACAGCCCAGCTCAGGTGGTGGAGAAAGACTCTGTGTTTATTCCATCAGGGTGGGACAATGAAAAAAAGATTGCCATCCTGCATGAAAATTTCCAGATGGTAAAAGCAGAAGACAGCTTTGAAGATGTAATAGTGAAACCTCCAGTTAGAAAGtTTGTACATGAGAAGGAAGTTCAAGCTGAAGATGACCAAGTATTTCTAGTAAAGTTGCAGTCTCTGTTATCTAAACAGCCTCCAGTTACTGCAGGCAGACCAGTGGACCCAACAAACAGAGCTCCCACAGGCTCACCAAGGACGACCAATCGTTCAGCAGCAGCTAACGTGGCTAACGTCATGCCCATGCAATCAGGAGGTCAGACCAGTGAGGGTGTCCTGGCTAACTTCTTCAACAGTCTCTTGACAAAGAAAGCAGGCTCTCCTGGTCCAGGTGGCCAACCTGCAGGAGGAGGGAGCAACACACCAGGAACAGTACGCAAGTCAGGCTCTAAGTTGGGGTTGACTGATGTCCAGGCTGAGCTGGACCGGATCTCCAACAAATCGGACCTGGACTCCTCAGCCCCTAACGCCACCACGCCCCCTGCTGAAAACGACAAATCCTGAACAAGAGGCAGGGATAATTCACCGGCAAGCCCCTCCCCCTTTACACTGTTCTCCAGCCCCTGAACCTGCCTTCCTTGTGCCACCTCTCCTCCCTTCCTCATCCTCACTATTTCTCTTTATCTTCTTCAGAAGGGGGGTGTTGTTCCTGTTTATTCCTTGTAAGGCCAGTGACTTGAAGCTGCATGTTGGGCAAATTGCATTTGCTATGTCTGtctccacacacacgcacacacatacagcagGCGGGTCTGTAAAAAACAAGGGGCAAGGTTGTCTTAGAAATAATGGACACTAGACGAGTGTTGGACActaaaagacaaaagaaaattgAGATGTTGATGAAGTCCAATTTGGGCTTAAAAGTGATTAGAGAATTTAAATGTGTCTGTAAGAGAGTTCGACTTTTTTATTGGCTTTTGGTAGTGAATTCTCATTCGAGGAACGCTGTATGAGTGAAAGTTACCTGGCTTCTAATAAACAAGCGCACATTTTACTTACCTAACGTCTCTTTAAGGCTCATTTAAAcaattcttttaaaaaatcatCACATTTCAGCCCGAGAGGAATTTGATCAGACGATTAATTGGATAGGGTCACCTTGCGATGGTGTCTTCATTAAATAGCCCTCTTTATATCCTGCCATATTCTTTGGTGTCTTGATCACAGGACCAGGACAAATATACTGACACGATTTCAATGCTTTATAATATTCATAACCCCGTTTTTGCTGCTGAGAAACAGATTCAAGTAAGATTAATGCGATCTGTTTAGAAGTATTTAAAAATTGCACTATTACTCAATAGTAGGCAATTACACTGAAAATAATCTTTCACAATGCCGATTGTAGCAGGGAATAGTACACTTAACAAAAGAGAGTTTTTAGCATAGACATGGTTTATGAAGTCATCTGTGTAACTGCTGAGCAAGACTATTGATGGGACTGACAACTATGTCcattgtaaaaattatttgtttgtttgtttgttttttatgttcatAAGAGCTTGAAGTTTGATacttctgtgtatgtgtgtgttctcatCTCAGCTACAGCCAGTTATGGCACCGTTTAATAATGGATGCACTAGAGATCATGCAATCGAGATCAGTATTACTGTCTTTACATTGttatgtatgtatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgcgcgcgtgcgtgcgtgcgtgcgtgtgcgtgcgtgcgtgtgtgcgtgtgagagttTTAGCTAAACGAGAAATTCAGCAGAACATTTGTCTGTTTAGAGACTTAAACGACTAGAAATTAGTAATGGGAAGGGAAGGGAGGGAGAAGGCAGAGGTGGCAGGGCAGGTGAGATCTCAAATCACCCTCACCTGCATGTACAGTCATCAACCAAACTTCTTACCAGAGGGAGGGGAAATAAACATACGCTAATATGGTCCTGTAATTTCACAAGATGTAGTAATGTTTCTCTGGATCAGGTCTGTAATCATTCTATTAAAGTTGTATTTATTGGGAA
>TCONS_00029046
CTTTCAGGGGTGTCACTCAAGCCTGCGAAGATGGCGACGACGGGCAGAAATACACTCCTATCGGTTAGCACAAATGTAAATAACAGCACTTCCGAAAGCCAAAACCCCGAGGAGGAGGATGGACAGAATTTATGGTCATCGATACTGAGTGAGGTGTCGACGCGCTCACGATCAAAATTGCCGTCAGGAAAAAATGTGGTGGTCATGGGTGAAGTAGGGTCTGGTAAGACCACCCTGGTTGCGAAACTCCAAGGTGTAGAAGAGTACATGAAGGGACGAGGCTTAGAGTACCTGTATTTCAATGTTCACGATGATGATATTGATGATCAATCACGGTGTAACGCATGGGTGCTAGATGGGGATTTGTACCACAAAGGTCTGCAGAAATTTGCTATATCGTTGGAAAACCTGGAGGACTCGCTGATTCTGTTTGTAGTGGATTTGTCCCGGCCATGGCTGGCCCTCGACTCACTGCAGAAATGGGGCAGTGTGGTGAGGGATTTTGTGGACAAGCTCAGAGTTCCTCCTGAAACCATGCGAGAACTGGAGCACAGATTGACAAAGCAGTTCCAGGAATATGTGGAACCAGGAAGTGACTTGGACGCTGTGCCCCAGAGGAGGAATCCTGAGTCAGATGAAGAGAGTGTCCTGTTGCCGCTGGgagaaaacacactcacacacaacctAGGCCTGCCTATAGTGGTGGTCTGCACCAAGTGTGATGCAATCAGCACTTTGGAGAAGGAGCACGATTATAAGGACGAGCACTTAGACTTCATCCAGTCTCACATTCGACGCTTCTGCTTGCAGTatggagcagcacTACTCTACACATCCATGAAGGAGAACAAGAATCTAGACTTGTTATATAAATACCTCGTTCACAGGTTATATGGCTTTCCGTTCAACAGCCCAGCTCAGGTGGTGGAGAAAGACTCTGTGTTTATTCCATCAGGGTGGGACAATGAAAAAAAGATTGCCATCCTGCATGAAAATTTCCAGATGGTAAAAGCAGAAGACAGCTTTGAAGATGTAATAGTGAAACCTCCAGTTAGAAAGtTTGTACATGAGAAGGAAGTTCAAGCTGAAGATGACCAAGTATTTCTAGTAAAGTTGCAGTCTCTGTTATCTAAACAGCCTCCAGTTACTGCAGGCAGACCAGTGGACCCAACAAACAGAGCTCCCACAGGCTCACCAAGGACGACCAATCGTTCAGCAGCAGCTAACGTGGCTAACGTCATGCCCATGCAATCAGGTACCAAGAAGATTGATCCCAACATGAAAGGAGGTCAGACCAGTGAGGGTGTCCTGGCTAACTTCTTCAACAGTCTCTTGACAAAGAAAGCAGGCTCTCCTGGTCCAGGTGGCCAACCTGCAGGAGGAGGGAGCAACACACCAGGAACAGTACGCAAGTCAGGCTCTAAGTTGGGGTTGACTGATGTCCAGGCTGAGCTGGACCGGATCTCCAACAAATCGGACCTGGACTCCTCAGCCCCTAACGCCACCACGCCCCCTGCTGAAAACGACAAATCCTGAACAAGAGGCAGGGATAATTCACCGGCAAG
>TCONS_00029047
ATGGCGACGACGGGCAGAAATACACTCCTATCGGTTAGCACAAATGTAAATAACAGCACTTCCGAAAGCCAAAACCCCGAGGAGGAGGATGGACAGAATTTATGGTCATCGATACTGAGTGAGGTGTCGACGCGCTCACGATCAAAATTGCCGTCAGGAAAAAATGTGGTGGTCATGGGTGAAGTAGGGTCTGGTAAGACCACCCTGGTTGCGAAACTCCAAGGTGTAGAAGAGTACATGAAGGGACGAGGCTTAGAGTACCTGTATTTCAATGTTCACGATGATGATATTGATGATCAATCACGGTGTAACGCATGGGTGCTAGATGGGGATTTGTACCACAAAGGTCTGCAGAAATTTGCTATATCGTTGGAAAACCTGGAGGACTCGCTGATTCTGTTTGTAGTGGATTTGTCCCGGCCATGGCTGGCCCTCGACTCACTGCAGAAATGGGGCAGTGTGGTGAGGGATTTTGTGGACAAGCTCAGAGTTCCTCCTGAAACCATGCGAGAACTGGAGCACAGATTGACAAAGCAGTTCCAGGAATATGTGGAACCAGGAAGTGACTTGGACGCTGTGCCCCAGAGGAGGAATCCTGAGTCAGATGAAGAGAGTGTCCTGTTGCCGCTGGgagaaaacacactcacacacaacctAGGCCTGCCTATAGTGGTGGTCTGCACCAAGTGTGATGCAATCAGCACTTTGGAGAAGGAGCACGATTATAAGGACGAGCACTTAGACTTCATCCAGTCTCACATTCGACGCTTCTGCTTGCAGTatggagcagcacTACTCTACACATCCATGAAGGAGAACAAGAATCTAGACTTGTTATATAAATACCTCGTTCACAGGTTATATGGCTTTCCGTTCAACAGCCCAGCTCAGGTGGTGGAGAAAGACTCTGTGTTTATTCCATCAGGGTGGGACAATGAAAAAAAGATTGCCATCCTGCATGAAAATTTCCAGATGGTAAAAGCAGAAGACAGCTTTGAAGATGTAATAGTGAAACCTCCAGTTAGAAAGtTTGTACATGAGAAGGAAGTTCAAGCTGAAGATGACCAAGTATTTCTAGTAAAGTTGCAGGACCCAACAAACAGAGCTCCCACAGGCTCACCAAGGACGACCAATCGTTCAGCAGCAGCTAACGTGGCTAACGTCATGCCCATGCAATCAGGTACCAAGAAGATTGATCCCAACATGAAAGGAGGTCAGACCAGTGAGGGTGTCCTGGCTAACTTCTTCAACAGTCTCTTGACAAAGAAAGCAGGCTCTCCTGGTCCAGGTGGCCAACCTGCAGGAGGAGGGAGCAACACACCAGGAACAGTACGCAAGTCAGGCTCTAAGTTGGGGTTGACTGATGTCCAGGCTGAGCTGGACCGGATCTCCAACAAATCGGACCTGGACTCCTCAGCCCCTAACGCCACCACGCCCCCTGCTGAAAACGACAAATCCTGA
>TCONS_00029048
TCAATGTTCACGATGATGATATTGATGATCAATCACGGTGTAACGCATGGGTGCTAGATGGGGATTTGTACCACAAAGGTCTGCAGAAATTTGCTATATCGTTGGAAAACCTGGAGGACTCGCTGATTCTGTTTGTAGTGGATTTGTCCCGGCCATGGCTGGCCCTCGACTCACTGCAGAAATGGGGCAGTGTGGTGAGGGATTTTGTGGACAAGCTCAGAGTTCCTCCTGAAACCATGCGAGAACTGGAGCACAGATTGACAAAGCAGTTCCAGGAATATGTGGAACCAGGAAGTGACTTGGACGCTGTGCCCCAGAGGAGGAATCCTGAGTCAGATGAAGAGAGTGTCCTGTTGCCGCTGGgagaaaacacactcacacacaacctAGGCCTGCCTATAGTGGTGGTCTGCACCAAGGTACAACAGCCTCAAATTGTTATTATGTTGTGATGACATAAAATGTATCTAAAAGATCAAATACAACTGATTTGATCAGAAAAAGCTGTTACTGTATAAAGGGCTTGAAATAAACtaactgt

Function

symbol description
dync1li1 Predicted to enable dynein heavy chain binding activity. Acts upstream of or within regulation of mitotic cell cycle, embryonic and regulation of mitotic spindle organization. Predicted to be located in cytoplasm and microtubule. Predicted to be part of cytoplasmic dynein complex. Predicted to colocalize with centrosome. Is expressed in liver. Orthologous to human DYNC1LI1 (dynein cytoplasmic 1 light intermediate chain 1).

GO:

id name namespace
GO:0009794 regulation of mitotic cell cycle, embryonic biological_process
GO:0007018 microtubule-based movement biological_process
GO:0060236 regulation of mitotic spindle organization biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0005813 centrosome cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005868 cytoplasmic dynein complex cellular_component
GO:0005874 microtubule cellular_component
GO:0030286 dynein complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0045504 dynein heavy chain binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003777 microtubule motor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-4108 Predicted to enable dynein heavy chain binding activity. Acts upstream of or within regulation of mitotic cell cycle, embryonic and regulation of mitotic spindle organization. Predicted to be located in cytoplasm and microtubule. Predicted to be part of cytoplasmic dynein complex. Predicted to colocalize with centrosome. Is expressed in liver. Orthologous to human DYNC1LI1 (dynein cytoplasmic 1 light intermediate chain 1).

Ensembl:

ensembl_id ENSDARG00000098317

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029045 False 3066 mRNA 0.45 13 18989911 19026028
TCONS_00029046 False 1565 mRNA 0.49 13 18991442 19026028
TCONS_00029047 False 1461 mRNA 0.49 12 18991471 19025998
TCONS_00029048 True 541 lncRNA 0.45 3 19016195 19023360

Neighbor

gene id symbol gene type direction distance location
XLOC_014699 FP067442.1 coding downstream 36705 18942726 ~ 18953206 (-)
XLOC_014698 FP074902.1 coding downstream 109787 18879002 ~ 18880124 (-)
XLOC_014697 NA coding downstream 126707 18860056 ~ 18863204 (-)
XLOC_014696 ppt2 coding downstream 134194 18846923 ~ 18855717 (-)
XLOC_014695 FP074902.3 coding downstream 148368 18841413 ~ 18841543 (-)
XLOC_014701 NA coding upstream 249785 19275813 ~ 19339337 (-)
XLOC_014702 smarcc1b coding upstream 316149 19342177 ~ 19379084 (-)
XLOC_014703 wipf3 coding upstream 411620 19437648 ~ 19446529 (-)
XLOC_014704 NA coding upstream 433023 19459051 ~ 19461297 (-)
XLOC_014705 creb5a coding upstream 470451 19496479 ~ 19505167 (-)
XLOC_014711 CR382300.3 misc upstream 702662 19728690 ~ 19728755 (-)
XLOC_014693 NA non-coding downstream 145498 18832068 ~ 18844413 (-)
XLOC_014706 NA non-coding upstream 484529 19510557 ~ 19512337 (-)
XLOC_014709 CR382300.5 non-coding upstream 683899 19709927 ~ 19710042 (-)
XLOC_014712 NA non-coding upstream 712751 19738779 ~ 19740396 (-)

Expression


Co-expression Network