XLOC_015055 (CU929178.1)


Basic Information

Item Value
gene id XLOC_015055
gene name CU929178.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47415590 ~ 47416405 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029643
AAGAGGAAAAGCAGAGAagagaaacaaaagaaaagagaaaataaaaagaaaaaaaagaaaaggaaaagaaaaaatgaaaaagataagcaaaataaaaaagaaaagaaagaaaaggagtaaaagaaatggagaaagaaaaggaaaagaaaaagataagtaaaaaaagaaaaaagaaaagaaagggagaaaatgaaaaggaagaaaaatcaagaaaaaaagaataaagaaaagaaagaaagtaaaaaaaggtaaaaagaaagggaaaaaaggaaaagaaaaggaagaaaagaaagggtaggaaaagcaaaaaagagaagagaaaaaaggaaaaagaaaaatgaaaatgaaaaagaacagaaaaataaaataaaaaaagtaaaaaagataaagaaaaggagaaaagaaaaggtaaaaaggaagaaaagaagaaaaagaaaaagtaaaaaaagaggaagaaaagaaaaaagagaaaaaaaaagaaaaataaaaaggaggaagaaaagaaaacaaaaagcgATAAAGTAAAAAaggaaaaggaagaaaaaagtaaaaaagaaaaaaggaggaagaaaagaaaaatgaacaaaaagaaagacaaaaatgaggaaaagaagaaaaagaaaaggaaaaataaaagaaaagaaaaagaaaaaagtaaaaaagaaaaagatagaaaagagaaagaaaatgaggaaaagggaaaaaaagacagaaaaaagaaaaagatgaaaaggaagaaaataaaaagaaaagataaaaaagaaaaaagtaaaaaagacaagaaagaaaaggaagaaaataaagacaagaaataga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098089

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029643 True 816 processed_pseudogene 0.23 1 47415590 47416405

Neighbor

gene id symbol gene type direction distance location
XLOC_015054 CU929178.2 coding downstream 15283 47400189 ~ 47400307 (-)
XLOC_015053 CU138512.2 coding downstream 92323 47285773 ~ 47323267 (-)
XLOC_015052 sdc2 coding downstream 139293 47191005 ~ 47276297 (-)
XLOC_015051 NA coding downstream 242182 46999261 ~ 47173408 (-)
XLOC_015050 angpt1 coding downstream 457622 46812272 ~ 46957968 (-)
XLOC_015056 tfap2e coding upstream 13317 47429722 ~ 47456787 (-)
XLOC_015057 ncdn coding upstream 44343 47460748 ~ 47474725 (-)
XLOC_015058 grem1a coding upstream 105602 47522007 ~ 47527192 (-)
XLOC_015059 actc1a coding upstream 133163 47549568 ~ 47555956 (-)
XLOC_015060 rrm2 coding upstream 148485 47564890 ~ 47571808 (-)
XLOC_014711 CR382300.3 misc downstream 27686835 19728690 ~ 19728755 (-)
XLOC_015047 NA non-coding downstream 923557 46491583 ~ 46492033 (-)
XLOC_015045 NA non-coding downstream 995032 46412613 ~ 46420558 (-)
XLOC_015038 NA non-coding downstream 1725175 45689237 ~ 45690415 (-)
XLOC_015061 CU695215.1 non-coding upstream 151308 47567713 ~ 47567848 (-)
XLOC_015063 NA non-coding upstream 344492 47760897 ~ 47761491 (-)
XLOC_015066 NA non-coding upstream 515493 47931898 ~ 47932934 (-)
XLOC_015069 NA non-coding upstream 601301 48017706 ~ 48024071 (-)
XLOC_015071 NA non-coding upstream 768893 48185298 ~ 48186157 (-)

Expression


Co-expression Network