XLOC_016625 (tradv30.0.6)


Basic Information

Item Value
gene id XLOC_016625
gene name tradv30.0.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36597322 ~ 36597793 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032650
GAAAAGAGTGAGAATAGGATCTATATACTTCCTAAAACAGGAAGGATGACACCGTGGATAAAACTATATATCGTTCTGTTCATGTACATTTGGGGAATAGAGTCGCAGGACAATGTTGAGCAGAAAGCAAGAGTTCAAACTGCTGTTGAAGGTGAAGCTGTTGAGATCGACTGCACATATCAAACCCAGCTCACCCCGACTCTCTTCTGGTACCAGCAAAAGACAAACACAATCCCAAAATATATGCTCAACAGAGTTGGAAAGACTGGAGGTGAAGACAAAGAATTCAAAGAAAGATTTACTGCAAATctcaacacattttcaaaatcAGTTCCTCTGATGATCAGAGATCTACATGTGTCAGACTctgctgtgtattactgtgcTCTGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087496

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032650 True 392 mRNA 0.41 2 36597322 36597793

Neighbor

gene id symbol gene type direction distance location
XLOC_016624 BX901889.5 coding downstream 87769 36509085 ~ 36509553 (-)
XLOC_016623 BX901889.1 coding downstream 96975 36499886 ~ 36500347 (-)
XLOC_016622 BX901889.4 coding downstream 100209 36496636 ~ 36497113 (-)
XLOC_016621 BX901889.2 coding downstream 103014 36493849 ~ 36494308 (-)
XLOC_016620 BX901889.3 coding downstream 106752 36490105 ~ 36490570 (-)
XLOC_016626 tradv23.3.8 coding upstream 761 36598554 ~ 36599044 (-)
XLOC_016627 tradv36.2.12 coding upstream 2717 36600510 ~ 36600943 (-)
XLOC_016628 tradv40.0 coding upstream 4696 36602489 ~ 36602952 (-)
XLOC_016629 tradv41.0 coding upstream 6359 36604152 ~ 36604589 (-)
XLOC_016630 CT027583.2 coding upstream 34883 36632676 ~ 36658701 (-)
XLOC_016619 NA non-coding downstream 171719 36379239 ~ 36425603 (-)
XLOC_016555 NA non-coding downstream 518684 36076196 ~ 36078638 (-)
XLOC_016553 NA non-coding downstream 863570 35728589 ~ 35733752 (-)
XLOC_016552 NA non-coding downstream 975455 35615395 ~ 35621867 (-)
XLOC_016546 NA non-coding downstream 2489337 34106830 ~ 34107985 (-)
XLOC_016633 NA non-coding upstream 149385 36747178 ~ 36826293 (-)
XLOC_016635 NA non-coding upstream 288950 36886743 ~ 36905394 (-)
XLOC_016638 NA non-coding upstream 334906 36932699 ~ 36933692 (-)
XLOC_016643 NA non-coding upstream 538875 37136668 ~ 37140483 (-)
XLOC_016644 NA non-coding upstream 555966 37153759 ~ 37155791 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01120807_00000192_00000767 NA coding CI01120807 null 118 ~ 767 (-)