Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_016628 |
| gene name | tradv40.0 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 36602489 ~ 36602952 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| tradv40.0 | Predicted to be involved in response to bacterium. |
| id | name | namespace |
|---|---|---|
| GO:0009617 | response to bacterium | biological_process |
| id | description |
|---|---|
| ZDB-GENE-141212-28 | Predicted to be involved in response to bacterium. |
| ensembl_id | ENSDARG00000102259 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00032653 | True | 345 | mRNA | 0.39 | 2 | 36602489 | 36602952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_016627 | tradv36.2.12 | coding | downstream | 1546 | 36600510 ~ 36600943 (-) |
| XLOC_016626 | tradv23.3.8 | coding | downstream | 3445 | 36598554 ~ 36599044 (-) |
| XLOC_016625 | tradv30.0.6 | coding | downstream | 4696 | 36597322 ~ 36597793 (-) |
| XLOC_016624 | BX901889.5 | coding | downstream | 92936 | 36509085 ~ 36509553 (-) |
| XLOC_016623 | BX901889.1 | coding | downstream | 102142 | 36499886 ~ 36500347 (-) |
| XLOC_016629 | tradv41.0 | coding | upstream | 1200 | 36604152 ~ 36604589 (-) |
| XLOC_016630 | CT027583.2 | coding | upstream | 29724 | 36632676 ~ 36658701 (-) |
| XLOC_016631 | ccnl1b | coding | upstream | 61221 | 36664173 ~ 36674005 (-) |
| XLOC_016632 | CT027583.1 | coding | upstream | 112558 | 36715510 ~ 36739594 (-) |
| XLOC_016633 | NA | coding | upstream | 144226 | 36747178 ~ 36826293 (-) |
| XLOC_016619 | NA | non-coding | downstream | 176886 | 36379239 ~ 36425603 (-) |
| XLOC_016555 | NA | non-coding | downstream | 523851 | 36076196 ~ 36078638 (-) |
| XLOC_016553 | NA | non-coding | downstream | 868737 | 35728589 ~ 35733752 (-) |
| XLOC_016552 | NA | non-coding | downstream | 980622 | 35615395 ~ 35621867 (-) |
| XLOC_016546 | NA | non-coding | downstream | 2494504 | 34106830 ~ 34107985 (-) |
| XLOC_016635 | NA | non-coding | upstream | 283791 | 36886743 ~ 36905394 (-) |
| XLOC_016638 | NA | non-coding | upstream | 329747 | 36932699 ~ 36933692 (-) |
| XLOC_016643 | NA | non-coding | upstream | 533716 | 37136668 ~ 37140483 (-) |
| XLOC_016644 | NA | non-coding | upstream | 550807 | 37153759 ~ 37155791 (-) |
