XLOC_016854


Basic Information

Item Value
gene id XLOC_016854
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 48711148 ~ 48714636 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033411
CTATAAATGAAGATTTATTGTTAGCCTCTCCAtcatatagatttaaaaaaatattttaagtcagTAACTGATCTGAGGTATGTCAAGCTGTAACCATTATTTTTATATCCGTTTTACAGGTTTTCATCAAAATTTGTGAATAAACATTCAATAAATGAAtccattttgtccctaaaatctAGTTATGAGGAGCGTGAAGAGGTCGTGGGCGATTTGATGTCCGCTTTGCTTTGTGTTCCTGGTCTGCAAAGGATTGAATTCAAGATCAGCAATCTAACAGAGAGCTGGGTGAGCAGGATTCTGTCTTTAGTGGAAGTCTGTCCCGGTCTACAGGAGATCAGGTTTGACTGCATAGAAAGCAATGGCTTAATGTTGGAGGATGTTGTGAGGATTTTGCAGAGCTCCCAGATGAATTCACATTGCAGGATCATCATCACAGGGATGAAGTGCAGTAAAGCATCCAGTGATGGGAAAGTAAATTTCACCTTCTGCAGAGACCCTCTCTCAAAGCTGCTCACAATACATAACATTAAACCAGAAGACAAGCATGGTGATGGAGATGATGACTTCAAGGAGCTTGATGAAGAAGACTTTATTGTTCTCTAGGGAAAATGAGGCCTATAAGGACAGAACACAAGGGTGTGAAGGCGGCTGTTAGCTTATTCAAAGCATTTGTACTTGAAGTTTACTAAAGATTTgtactttaattaatttttagCAAGACAGGTGGCTTTTTTACATATTCAAACTTGAGAAATGTTGGCTGATGCTTattctgactttaatttgttatgaattaatttattaataatttttttagaaatcTCAAACTACTTCCACTGATGCAATTGACAGAAAAACAATATAGGAAGCTAAAAAGGGTCACTTAGCGATGCTgtttaagaaaattaaatgaagaaaGTATTTGTCagattatatatatttgtaagaaTGCTACAGTATCATTTCACAAGAGTGTGTTGTAGTAATATATATCCATAGTTTAGAACTAAATGGGTATTTTTTAATGTACTAGTTCAGGTAATTGGAATAGATTACTTGATTGTATCATCGTGATgcaaataaatagtatttttacaAGGGAAGTAAAACATGCAAGGTTAATTACACAGTtcatgattttaattttttaatattgagGAATGGAAATAAGCTGACGatttttgtatgtgtattttatCTTAGACCGTTTTGAAATgtgtataaattgtattttttattttagttttggttTCAATTAACCGAATAAAC

Function

GO:

id name namespace
GO:0070884 regulation of calcineurin-NFAT signaling cascade biological_process
GO:0106056 regulation of calcineurin-mediated signaling biological_process
GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033411 True 1272 lncRNA 0.33 4 48711148 48714636

Neighbor

gene id symbol gene type direction distance location
XLOC_016853 NA coding downstream 75568 48634551 ~ 48635580 (-)
XLOC_016852 CR381673.3 coding downstream 146202 48564830 ~ 48564946 (-)
XLOC_016851 si:dkeyp-94g1.1 coding downstream 149677 48545804 ~ 48561471 (-)
XLOC_016850 CR391991.4 coding downstream 171475 48519594 ~ 48539673 (-)
XLOC_016848 CR391991.1 coding downstream 198698 48478399 ~ 48512450 (-)
XLOC_016855 NA coding upstream 16843 48731479 ~ 48732528 (-)
XLOC_016856 NA coding upstream 24906 48739542 ~ 48743994 (-)
XLOC_016857 CABZ01044731.1 coding upstream 32047 48746683 ~ 48746812 (-)
XLOC_016858 CABZ01044731.2 coding upstream 33618 48748254 ~ 48753873 (-)
XLOC_016859 svilb coding upstream 103322 48817958 ~ 48826707 (-)
XLOC_016845 NA non-coding downstream 288015 48418390 ~ 48423133 (-)
XLOC_016843 NA non-coding downstream 304943 48405044 ~ 48406205 (-)
XLOC_016842 NA non-coding downstream 315087 48394943 ~ 48396061 (-)
XLOC_016862 NA non-coding upstream 626951 49341587 ~ 49348204 (-)
XLOC_016864 NA non-coding upstream 732151 49446787 ~ 49454453 (-)

Expression


Co-expression Network