XLOC_016856



Basic Information


Item Value
gene id XLOC_016856
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 48739542 ~ 48743994 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033952
CAATACACAGACATAAAAAGCGAAAATACATTATAGGCTAACCCATGCTCGTGCTCGAGTTTTGTTTCGTGAGCTCTGATCCATGATGCTGATAAGTGTTCGCCCTCAGGGAGGATCTCATTGTCGAATAAAAAGCGAAAGTATTTTTCCTCCATGGTATCATCAATTCTGTACAATCTCTCGGGACTACACAGCGATGTTCAAGCTCCAGGCTGATCTGGTCATTTCAGATTAGAGAAATCCACAGACATATTGTAAAAGCAGATGGACATGTCTGATCATGACAATGTGGGATCTGTGGAGCCTCATGGAGTGTCTAAAATCACCATCTCTGCTCAGAATGGAAGCAGTGTTTCAGCACCTGTGATTTTAAACTCAACAGTCACAGGAAATATTAGTATTTCTAATAATTTCTTTCCTGAACCTGCAGCTGAAGTCACAGGTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033952 True 445 lncRNA 0.41 4 48739542 48743994

Neighbor


gene id symbol gene type direction distance location
XLOC_016855 NA coding downstream 7014 48731479 ~ 48732528 (-)
XLOC_016854 NA coding downstream 24906 48711148 ~ 48714636 (-)
XLOC_016853 NA coding downstream 103962 48634551 ~ 48635580 (-)
XLOC_016852 CR381673.3 coding downstream 174596 48564830 ~ 48564946 (-)
XLOC_016851 si:dkeyp-94g1.1 coding downstream 178071 48545804 ~ 48561471 (-)
XLOC_016857 CABZ01044731.1 coding upstream 2689 48746683 ~ 48746812 (-)
XLOC_016858 CABZ01044731.2 coding upstream 4260 48748254 ~ 48753873 (-)
XLOC_016859 svilb coding upstream 73964 48817958 ~ 48826707 (-)
XLOC_016860 kcnj9 coding upstream 206793 48950787 ~ 48966431 (-)
XLOC_016861 cdc34b coding upstream 263598 49007592 ~ 49031303 (-)
XLOC_016845 NA non-coding downstream 316409 48418390 ~ 48423133 (-)
XLOC_016862 NA non-coding upstream 597593 49341587 ~ 49348204 (-)
XLOC_016864 NA non-coding upstream 702793 49446787 ~ 49454453 (-)
XLOC_016865 NA non-coding upstream 777255 49521249 ~ 49522277 (-)
XLOC_016868 BX323861.2 non-coding upstream 922762 49666756 ~ 49667049 (-)

Expression



Co-expression Network