XLOC_017087


Basic Information

Item Value
gene id XLOC_017087
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 2480910 ~ 2481815 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036540
acacacataaacacttacacacacttgcacacagacacacacacttatacacatacacaagcacacacacacactcctttacTGACATTACAGACCAGACAATAGTCTCATACACACTGTAggttaataaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactccttctTTAACAGAACAGACCAGCAAATACTGTCATACACACTGTAGGtttagaaaacacacacacacacacatacacatacacctATACTAACAGACCAGCAAATACTGTCATACACACTTTATgtttataaaacacacacacaaacactgaaaaTCATCCCACGTTACCGGtttagaaaacacacacacacacacacacacacatattcatatatatatatatatatatatatatatatatatatatatatatatacacacacacacacacacacacattcactgaaTGTTCAGACCAGCAAATTGTCTCAAAcattctgtacacacacacacacacacacacgcacacagtcaGTACTGGAGGGAGGCCGGcctgtgattggctgacagtGATTTGGGGTGGTCTTGAACTCTACATGAGTTGTGTTTCTTCCTGTTTGATGTGTATGACGCTTCAGAAAAGCACCCACAGTGGCCTTAGAGCATCACACCCTGTTATAATGCTGAAGAGCGTGTATGTGtgcgcgcacgtgtgtgtgtgtgtttggtttcaCACCAGATCCTTAAGCTCTTCTTTTCCTCGGCTCGTGTTGATCAAGtgtttgatttgtgtgtgtgtgaacagtgctATGATGATGTCATCGCTCAGCGTTTATCCCCCATCTGTCACTTTTTTACTCTTCAAAATAAAGATGGCGGCGGTGACTCGA

Function

GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0072376 protein activation cascade biological_process
GO:0072378 blood coagulation, fibrin clot formation biological_process
GO:0009611 response to wounding biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0043627 response to estrogen biological_process
GO:0030193 regulation of blood coagulation biological_process
GO:0071391 cellular response to estrogen stimulus biological_process
GO:0007596 blood coagulation biological_process
GO:1900046 regulation of hemostasis biological_process
GO:0007599 hemostasis biological_process
GO:0010466 negative regulation of peptidase activity biological_process
GO:0045861 negative regulation of proteolysis biological_process
GO:0044281 small molecule metabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0051346 negative regulation of hydrolase activity biological_process
GO:0050817 coagulation biological_process
GO:0042060 wound healing biological_process
GO:0044421 obsolete extracellular region part cellular_component
GO:0005576 extracellular region cellular_component
GO:0005577 fibrinogen complex cellular_component
GO:0005615 extracellular space cellular_component
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036540 True 906 lncRNA 0.41 1 2480910 2481815

Neighbor

gene id symbol gene type direction distance location
XLOC_017086 akap7 coding upstream 1460 2460864 ~ 2479450 (+)
XLOC_017085 NA coding upstream 196097 2281624 ~ 2284813 (+)
XLOC_017084 BX681416.1 coding upstream 214298 2261933 ~ 2266612 (+)
XLOC_017083 tmem200a coding upstream 238956 2227860 ~ 2241954 (+)
XLOC_017082 NA coding upstream 266489 2213689 ~ 2214421 (+)
XLOC_017088 NA coding downstream 25085 2506900 ~ 2508095 (+)
XLOC_017089 il20ra coding downstream 107599 2589414 ~ 2609270 (+)
XLOC_017090 zgc:101562 coding downstream 161040 2642855 ~ 2647566 (+)
XLOC_017091 slc35a1 coding downstream 187202 2669017 ~ 2679683 (+)
XLOC_017092 syncrip coding downstream 249621 2731436 ~ 2745385 (+)
XLOC_017074 NA non-coding upstream 755862 1663759 ~ 1725048 (+)
XLOC_017070 NA non-coding upstream 1125227 1354663 ~ 1355683 (+)
XLOC_017093 CABZ01027815.1 non-coding downstream 426736 2908551 ~ 2908665 (+)
XLOC_017097 NA non-coding downstream 830847 3312662 ~ 3315637 (+)
XLOC_017099 LO018608.1 non-coding downstream 921832 3403647 ~ 3416581 (+)
XLOC_017107 CABZ01067980.1 non-coding downstream 1822642 4304457 ~ 4307735 (+)

Expression


Co-expression Network