XLOC_017082


Basic Information

Item Value
gene id XLOC_017082
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 2213689 ~ 2214421 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036362
TGTGGTGTAAATAGATGAAACTGGTCTCAggtggtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctcctcaTAGCACATCTGTGCCTCATGTTCAGACACTGGGACATTTCTCCTCAAAACATCTTTCGCTCTAATCTGAACACATCTGCTTTCAATCTGAAAaggaaagtcATATTTTCCATATACCCGTCACAAAACAGGGGGAAGCGCTTTTCTTTTGTCAACTGCAGTCATTTACCAAGGCTAACACACACGAGGGGAGACAATAGAagtgtttaaatatttacaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036362 True 335 lncRNA 0.43 2 2213689 2214421

Neighbor

gene id symbol gene type direction distance location
XLOC_017081 l3mbtl3 coding upstream 7379 2134816 ~ 2206310 (+)
XLOC_017080 BX681416.2 coding upstream 67143 2099243 ~ 2146546 (+)
XLOC_017079 CABZ01088134.1 coding upstream 159142 2039518 ~ 2054547 (+)
XLOC_017078 CABZ01092781.1 coding upstream 178569 1996202 ~ 2035120 (+)
XLOC_017076 lama2 coding upstream 234037 1903481 ~ 1979652 (+)
XLOC_017083 tmem200a coding downstream 13439 2227860 ~ 2241954 (+)
XLOC_017084 BX681416.1 coding downstream 47512 2261933 ~ 2266612 (+)
XLOC_017085 NA coding downstream 67203 2281624 ~ 2284813 (+)
XLOC_017086 akap7 coding downstream 246443 2460864 ~ 2479450 (+)
XLOC_017087 NA coding downstream 266489 2480910 ~ 2481815 (+)
XLOC_017074 NA non-coding upstream 488641 1663759 ~ 1725048 (+)
XLOC_017070 NA non-coding upstream 858006 1354663 ~ 1355683 (+)
XLOC_017065 NA non-coding upstream 1009815 1200292 ~ 1203874 (+)
XLOC_017061 NA non-coding upstream 1313309 896905 ~ 900380 (+)
XLOC_017056 NA non-coding upstream 1531397 681847 ~ 682292 (+)
XLOC_017088 NA non-coding downstream 292479 2506900 ~ 2508095 (+)
XLOC_017093 CABZ01027815.1 non-coding downstream 694130 2908551 ~ 2908665 (+)

Expression


Co-expression Network