XLOC_017113 (BX649499.2)


Basic Information

Item Value
gene id XLOC_017113
gene name BX649499.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 5051189 ~ 5057952 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034142
GCCCAGCTGTGGCTGGCAGCTGGGCTGTACGGGGAGCTCATGTCTTTGCCCAAACCCATACCCGACTGCTGCTGCTGCGATGGCGGGTTGCTGTAATCTTGATAGCCGCCACCGTATCCCCGCATCATCGGACTCGGGGATGTCAGGAGCTGGTTCAGGGATTGCTATCCTTTCTACAGTCTTCAGGAATATTTTTCACAATTCTGATTTCTTAAACTATCTACCCATCTCAGATAGCAGCAGATCCATGTCGGATTTTCCTAAGCGCCGCGGAATTGGTCTGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096608

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034142 True 285 lncRNA 0.52 2 5051189 5057952

Neighbor

gene id symbol gene type direction distance location
XLOC_017112 tmem242 coding upstream 154834 4885298 ~ 4896355 (+)
XLOC_017111 lgals8a coding upstream 237091 4793516 ~ 4814098 (+)
XLOC_017110 im:7142702 coding upstream 596395 4392687 ~ 4454794 (+)
XLOC_017109 tiam2b coding upstream 706082 4334008 ~ 4345107 (+)
XLOC_017108 CABZ01067979.1 coding upstream 732716 4309521 ~ 4318473 (+)
XLOC_017114 si:dkey-60a16.1 coding downstream 7316 5065268 ~ 5070324 (+)
XLOC_017115 ccnk coding downstream 16166 5074118 ~ 5094423 (+)
XLOC_017116 dre-mir-7146 coding downstream 16972 5074924 ~ 5075054 (+)
XLOC_017117 cyp46a1.1 coding downstream 48616 5106568 ~ 5120937 (+)
XLOC_017118 zgc:123299 coding downstream 74186 5132138 ~ 5145333 (+)
XLOC_017107 CABZ01067980.1 non-coding upstream 743454 4304457 ~ 4307735 (+)
XLOC_017099 LO018608.1 non-coding upstream 1634608 3403647 ~ 3416581 (+)
XLOC_017097 NA non-coding upstream 1735552 3312662 ~ 3315637 (+)
XLOC_017093 CABZ01027815.1 non-coding upstream 2142524 2908551 ~ 2908665 (+)
XLOC_017119 CU571247.1 non-coding downstream 366010 5423962 ~ 5424096 (+)
XLOC_017124 NA non-coding downstream 1154858 6212810 ~ 6214789 (+)
XLOC_017125 CABZ01086587.1 non-coding downstream 1277344 6335296 ~ 6335411 (+)
XLOC_017131 CR788301.1 non-coding downstream 1861796 6919748 ~ 6919864 (+)

Expression


Co-expression Network