XLOC_017448 (si:ch211-199m3.1)


Basic Information

Item Value
gene id XLOC_017448
gene name si:ch211-199m3.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 33679500 ~ 33680446 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034676
CCGTTTGAGTGATTCACGGTGCAAGACCGAAATCCTCATCCTATTCCAGCTAGCAAACCCCAAGTTTTTGAGTGGTTACAGGTGAAAGACTGAAACCCTGTACCGATTATATGATGGTTGAACAGATTTCTGATCTCCCCACAACATCAGCTGCTAAAATGGAGGAAAACGAAGTTCCCGAACCCTGCAAGATCTCCAAGAGCCAGAAACAAGTGAAGCAGCTCAAAGAAAGGCCAAGAAATGGCATTAATAaTGAGAAGGAGAAagtaaaagaaaagagaaagaagagaaagaagaGCAAGGTTGCTTCTTTCATCAGAGCTGCTCTTCGATGGTTCTGCTTCTGTCCTCGTAATGAGCCGTTCACACTTTCCTCATCTGATGGTAAATGATGGTTTTTGCATCTCAATATTTTCTAGTGTATAAtgtcattaataaactgtatttttactccCCTTTA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-338 No description available

Ensembl:

ensembl_id ENSDARG00000112587

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034676 True 460 mRNA 0.41 2 33679500 33680446

Neighbor

gene id symbol gene type direction distance location
XLOC_017447 si:dkey-65b13.8 coding upstream 67760 33610271 ~ 33611740 (+)
XLOC_017446 si:dkey-65b13.8 coding upstream 80508 33560419 ~ 33598992 (+)
XLOC_017445 kcnf1a coding upstream 142257 33532296 ~ 33537243 (+)
XLOC_017444 drc1 coding upstream 149075 33519435 ~ 33530425 (+)
XLOC_017443 mycn coding upstream 380116 33294428 ~ 33299384 (+)
XLOC_017449 ak9 coding downstream 27872 33708318 ~ 33737831 (+)
XLOC_017450 ppil6 coding downstream 58613 33739059 ~ 33743295 (+)
XLOC_017451 henmt1 coding downstream 63619 33744065 ~ 33749174 (+)
XLOC_017452 olfml2ba coding downstream 111710 33792156 ~ 33806508 (+)
XLOC_017453 rxrgb coding downstream 194810 33875256 ~ 33920055 (+)
XLOC_017441 NA non-coding upstream 620956 33057784 ~ 33058544 (+)
XLOC_017440 NA non-coding upstream 829397 32827420 ~ 32850103 (+)
XLOC_017433 CU138515.1 non-coding upstream 1209046 32466886 ~ 32470454 (+)
XLOC_017431 BX927123.1 non-coding upstream 1277140 32270907 ~ 32402360 (+)
XLOC_017430 BX842669.1 non-coding upstream 1438531 32231609 ~ 32240969 (+)
XLOC_017455 BX296562.2 non-coding downstream 279124 33959570 ~ 33975292 (+)
XLOC_017471 BX279523.2 non-coding downstream 981109 34661555 ~ 34663198 (+)
XLOC_017472 BX279523.3 non-coding downstream 982876 34663322 ~ 34664762 (+)
XLOC_017475 NA non-coding downstream 1081297 34761743 ~ 34766443 (+)
XLOC_017476 NA non-coding downstream 1084004 34764450 ~ 34765817 (+)

Expression


Co-expression Network