XLOC_017579 (pimr110)


Basic Information

Item Value
gene id XLOC_017579
gene name pimr110
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 42881104 ~ 42885820 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034909
ATTGCTTTAATTGGACAGCTACAGAGAAGTTGTACAACATTTGCTCTAAGTAATTTGCGTTGCAAATACTGTCAATTGATAGCGTACGGTTTATTAAGGTTTACTTTGATAAACTAACTTTACCTACAGTAAGTTTGAGTATTTATTGTAGgtttatttaacatttctcaTCTTTAAGTCTACGGAAATTAAACTATCATGTTGTTTACCGTACTCGGACTCATCGCTCTCTTCCTCGGAGAGAGAAACGCCAACGCCACTGTTGGTGTTGAAGTTCAAGAAGAGGACCAACATGATGTACCACCCTTGAGGAGCAGTGACGGTCAAGAAATAGATGCCTGCTGTAAAGAACCATTACTGGtagagcctgtcagtgttcacagtgaaGAGCCATCACTGGTtgagcctgacagtgttcacagtgagcaaccatcactggtagagcctgtcaGCGTTCACAAtgaagaaccatcactggtagagcctgtcaGCGTTCACAgtgaagaaccatcactggtagagtCTGTTAGTGTTCACAGTGAGCAACCATCACTGGTAGAGTCTGTTAGTGTTCACAGTGAGcaaccatcactggtagagcctgacagtgttcacagtgagcaaccatcactggtagagcctgacagtgttcgCAGTGAGCAACCATCACTGGTtgagcctgacagtgttcacagtgagcaaacatcactggtagagcctgacagtgttcacagtgaagaaccatcactggtagagcctgtcaGCGTTCACAGTGAGcaaccatcactggtagagcctgtcaGCGTTCACAGTGAGcaaccatcactggtagagcctgtcaGTGATGATCCTTCATTTGATTTCTCTGATGAGCCCGGCTCCCACGCCGTTGAAGATGCAACCTGTCAGACAGAGGACAAAGAGACACAAATCATTGAGATCAATTCACAAGGCTATGAAATTGGCGCTGAGCTGGATAAAGGAGGCTGTGGAACCGTTTACGAAGGGTCCCGATTAGAAGATGGCCTTCAGGTGGCAGTAAAAGTGTCCAATTTTAAGAAGAAGCAATTGATCAGTGTTGATGGGTTTGATGAACCACTTCCACTGGAGATTGCTCTGCACTTTCTGGCCAATAAAGGCCCCAAGGTCAAGGAAATTATCGAGCTTCTGGACTGGAAGGTTGAGGCTGATCACTACTTTATGGTGCTAGAGCGGCCCATACCCTGCGTGAGCTTGTTCGATTTCCTAAGTAAGCACAGAGGCATCCTTCCAGAGGACAAGTTGCGGAAAATCATGCTCCAGACAATAATTGCTGCCCAAACATGCTGCCAGCGTGGAGTTCTTCACCGCGATATTAAGCTGGAGAACTTGCTGATTAACCCGGACACCCTTGAGGTCAAACTGATTGACTTCGGATGTGGTGACCTCCTTACTGAGGACATTTACAAAGAATTTAAAGGCACCAAAGAGTTCGCCCCTCCTGAGTTTTGGAGGATTGGCAGATACCGTGGGAAACCAGCGACAGTCTGGTCACTTGGAGTTGTTCTGTTTGTGCTGATTTTCTGCAGATATCCAGGAAAAGCAGACCTTCCCAAAGTGAATAACAAACACATACCGATTAATGGCTTGTCGAAAGAATGCTGCGATTTCTTCCACGGCTGTCTGCAGCTGAACCAAATGGATCGACTTGACCTGCAAAAGCTCAATTCCCATGAGTGGTTTAAAGAATTGAATACATTTTGACATCAGCCATCTTACACTGTCATAAGCCGGGTTTCCATCCTAATGTGATGTTAATTAGGTGCATTTCCATCAAGCTGTTAGAGCAGCTGACTGTaatattggtaacctagtaactaATACTAAGCAAGACAAGTATAATGGAGTCATGTTTGTGTAATGTTCACTATGTTagtttattcagcaaatgtgTCTCCATCTCCCGTTTTCAGCATTAGTTTTTTGCACCACCCCAAGTGAGCattaacagtatttatttttttgcaaattaattgatatttaaaacTGATTTCTATTACTCATTTTAACACCGGCTGATGGAAACCAAGCTATATCTTATGTTCTTTCATTTATACTTATTGTATATATTGCTTTTCTTTTTACTACATGTTGTAGTCCTATAGCTGAAAGCCGTTAAATTCAAAAAGAATAAGAAAGAAATTttgtgtaaaaaagaaaaaaaaatggaaaaagcaCTTAACAGTTTAGACCTTTATATATTGTACCTTCCTGCACTTTATTATCAGCTTTTACACTAACTTTTGCAATTCCacatgctaaaaaaataaaataaaaatgtatatctcAGTCGTTCCCAGTCCAGGTCCACATATTTTGGGTGTCTCTCTCTAAGAAATGTAATTTGAGCCAGAGGAGAGAGACTCCTGACCAAAGACTACTGGGATCAACtgatatatatacagggtttccAATGAACATTATCACTCACCAGCCAATTtgaaaaaaactggaaaaacaattaataaaataaaacaat

Function

symbol description
pimr110 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-282 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000016605

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034909 True 2518 mRNA 0.42 6 42881104 42885820

Neighbor

gene id symbol gene type direction distance location
XLOC_017578 pimr213 coding upstream 96849 42780162 ~ 42784255 (+)
XLOC_017577 pimr113 coding upstream 113519 42761881 ~ 42767585 (+)
XLOC_017576 slc22a2 coding upstream 192617 42668875 ~ 42688487 (+)
XLOC_017574 igf2r coding upstream 220448 42563618 ~ 42660656 (+)
XLOC_017575 AL929119.1 coding upstream 247999 42632985 ~ 42633105 (+)
XLOC_017580 NA coding downstream 5053 42890873 ~ 42959779 (+)
XLOC_017581 si:ch211-203k16.3 coding downstream 92679 42978499 ~ 43013017 (+)
XLOC_017582 NA coding downstream 194235 43080055 ~ 43081035 (+)
XLOC_017583 moxd1l coding downstream 197925 43083745 ~ 43106423 (+)
XLOC_017584 dusp23a coding downstream 227645 43113465 ~ 43118411 (+)
XLOC_017572 NA non-coding upstream 388267 42381047 ~ 42492837 (+)
XLOC_017571 NA non-coding upstream 580848 42296266 ~ 42300256 (+)
XLOC_017569 NA non-coding upstream 657207 42220734 ~ 42223897 (+)
XLOC_017568 NA non-coding upstream 677571 42203150 ~ 42203533 (+)
XLOC_017585 NA non-coding downstream 310823 43196643 ~ 43196852 (+)
XLOC_017588 NA non-coding downstream 529981 43415801 ~ 43422764 (+)
XLOC_017589 AL928920.4 non-coding downstream 538182 43424002 ~ 43429323 (+)

Expression


Co-expression Network