XLOC_017582


Basic Information

Item Value
gene id XLOC_017582
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 43080055 ~ 43081035 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036410
CTCTTGTAGAAGCAAATTTTTGTTAGACCTGTACATGGATGACTTTGTCAATGGTCCCAAATTCtctatttttcaaaaataaataaataaataaataaataaataattgattaaagaccccctattatgcattataaaattgcctgttttttgggggggatcTCCAAGAACAAGCTGAAATGCATGCAGagtaaaaacaaagaaatattgtcatataataaattattataaaatataattatattaaatgtacttaCCTAAACCTTCTTAAAATCGCAGTATATACATCAACATTCTgcttaaacaacaaaataaaaaaacaaagaaagtcGAGTTGTCACGTGGTTTCTATGGTGGTCCAATCACGTTTCACGTCGGTTTTAACAAATGAAGCGAGATTTTTTAACATGTCagCACATTCGCACACATGTAGAGCTACCAAGAGCTATCAAACAAAGTGGATGGACTTACCAACTCCTAGCAAAGTAAGTATGCTTGATTTGTATTATAAgtgta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036410 True 516 lncRNA 0.31 2 43080055 43081035

Neighbor

gene id symbol gene type direction distance location
XLOC_017581 si:ch211-203k16.3 coding upstream 67038 42978499 ~ 43013017 (+)
XLOC_017580 NA coding upstream 120276 42890873 ~ 42959779 (+)
XLOC_017579 pimr110 coding upstream 194235 42881104 ~ 42885820 (+)
XLOC_017578 pimr213 coding upstream 295800 42780162 ~ 42784255 (+)
XLOC_017577 pimr113 coding upstream 312470 42761881 ~ 42767585 (+)
XLOC_017583 moxd1l coding downstream 2710 43083745 ~ 43106423 (+)
XLOC_017584 dusp23a coding downstream 32430 43113465 ~ 43118411 (+)
XLOC_017585 NA coding downstream 115608 43196643 ~ 43196852 (+)
XLOC_017586 unc93a coding downstream 297994 43379029 ~ 43389475 (+)
XLOC_017587 pimr138 coding downstream 315283 43396318 ~ 43403699 (+)
XLOC_017575 AL929119.1 non-coding upstream 446950 42632985 ~ 42633105 (+)
XLOC_017572 NA non-coding upstream 587218 42381047 ~ 42492837 (+)
XLOC_017571 NA non-coding upstream 779799 42296266 ~ 42300256 (+)
XLOC_017569 NA non-coding upstream 856158 42220734 ~ 42223897 (+)
XLOC_017588 NA non-coding downstream 334766 43415801 ~ 43422764 (+)
XLOC_017589 AL928920.4 non-coding downstream 342967 43424002 ~ 43429323 (+)
XLOC_017590 NA non-coding downstream 350702 43431737 ~ 43434597 (+)
XLOC_017591 NA non-coding downstream 358102 43439137 ~ 43467982 (+)

Expression


Co-expression Network