XLOC_017593


Basic Information

Item Value
gene id XLOC_017593
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 43588656 ~ 43589781 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036672
CTCGAGTATTTAGACTTGTTCATTTGAGTTAGAGGAGTTTTATCAGTGTTATTTTTATCACCGACTTTACCTCAATTGATTTAAATAGTTCTCCGGATGCAGAGGAACTATACATGGAGAAAACAACAAACCTACTAGTACAAGTGGAAAGCGGATTCCTGCATGTTTGTTGACAGATGCTTCTGaaaaggcaacgcagtggcgcagtaggtagtgctgtcacctcacagcaagaaggtcgctggtttgagcttcg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036672 True 256 lncRNA 0.42 2 43588656 43589781

Neighbor

gene id symbol gene type direction distance location
XLOC_017592 NA coding upstream 33140 43548991 ~ 43555516 (+)
XLOC_017591 NA coding upstream 120674 43439137 ~ 43467982 (+)
XLOC_017590 NA coding upstream 154059 43431737 ~ 43434597 (+)
XLOC_017589 AL928920.4 coding upstream 159333 43424002 ~ 43429323 (+)
XLOC_017588 NA coding upstream 165892 43415801 ~ 43422764 (+)
XLOC_017594 si:dkey-206f10.1 coding downstream 13029 43602810 ~ 43644531 (+)
XLOC_017595 parp1 coding downstream 58588 43648369 ~ 43689779 (+)
XLOC_017596 lin9 coding downstream 101427 43691208 ~ 43715242 (+)
XLOC_017597 clic5b coding downstream 335485 43925266 ~ 43968859 (+)
XLOC_017598 NA coding downstream 384752 43974533 ~ 43995913 (+)
XLOC_017600 LO018405.2 non-coding downstream 549964 44139745 ~ 44139861 (+)
XLOC_017601 LO018405.1 non-coding downstream 608917 44198698 ~ 44198815 (+)
XLOC_017605 CR545466.1 non-coding downstream 926382 44516163 ~ 44537787 (+)
XLOC_017606 NA non-coding downstream 974151 44563932 ~ 44567256 (+)

Expression


Co-expression Network