XLOC_017678



Basic Information


Item Value
gene id XLOC_017678
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 48496540 ~ 48499747 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036706
GAGAACTCTTCGAGTCaaaataaaaggttttgtgaATACAGGCCTTGGTTTTTAATGTACTGTAGAAGTGAAACATACTTTGTGAGCTGATGGAGTTTTTCTGGCGACTGGTTTTGCCACATGAAGAGTGGAATGAGGTGGAGCTGGTCAGGCGGAGGGTCGACGGGACGCTCCAGAGTCGGGTCACACTGGGCCAGGAGGACAGATGCCAAACTTTGGCCCACCTCTTTGGATTGAAAGCAGCAATGGCTCCACTCTTCTGCATGGTAGCGGCGGGAGTATTTGGTCATGGGGCCTGCGGCGTATATGGAGGGGTCATTGGTGTGAAAGCCGCTGTCTACAACCAATCGCCCATCAAACACCAAACACGCATCATTGATGGCCCTGAAAGCGTCACAGTCCACGCTTTTACGAGAGAAGCTGAAGAACACCTGCG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036706 True 436 lncRNA 0.51 2 48496540 48499747

Neighbor


gene id symbol gene type direction distance location
XLOC_017677 CABZ01059119.1 coding upstream 48700 48413712 ~ 48447840 (+)
XLOC_017676 tram2 coding upstream 356599 48116476 ~ 48139941 (+)
XLOC_017675 xkr5a coding upstream 391277 48100261 ~ 48105263 (+)
XLOC_017674 NA coding upstream 413143 48072385 ~ 48083397 (+)
XLOC_017673 NA coding upstream 428452 48061746 ~ 48068088 (+)
XLOC_017679 NA coding downstream 2681 48502428 ~ 48517458 (+)
XLOC_017680 LO018254.1 coding downstream 43745 48543492 ~ 48545232 (+)
XLOC_017681 NA coding downstream 68507 48568254 ~ 48569823 (+)
XLOC_017682 NA coding downstream 70713 48570460 ~ 48571101 (+)
XLOC_017683 NA coding downstream 71560 48571307 ~ 48583599 (+)
XLOC_017672 NA non-coding upstream 461865 47988451 ~ 48034675 (+)
XLOC_017671 CU138532.1 non-coding upstream 514269 47982137 ~ 47982271 (+)
XLOC_017669 BX005121.1 non-coding upstream 736632 47759786 ~ 47759908 (+)
XLOC_017684 BX663521.6 non-coding downstream 110605 48610352 ~ 48610467 (+)

Expression



Co-expression Network