XLOC_017679


Basic Information

Item Value
gene id XLOC_017679
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 48502428 ~ 48517458 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036707
TCTGTTCCTGACCGCACACTCCAGCTGTAGAATGGCTCCATCCGTGCTGAAAGAGGCAGATGTCACAGGCTCTGTGTGTTGtccatcattgatctgcagcaACAGGCAGTTGTGATGAACATGGACTTCCTCTTTTTCTAGAGCCTGTTTCACTGCCAGCTCCACTGAAGCGTCGGGGAAACAGGAGAATGGTTGATCTTCAGGAGGATGGACTACATGAATCCTGCGGCCACTGACACCGAGACCAATGAGAGTCTCTATGCAGaaatgAATGCCATTGAACGAGGAGAGGACAGTAACAAAAGCACGCGGGTGTGTGTGAGGTTATTCTGCAAACACTCGACGGACAGATGCTGAAATCCCTTAATTTCCAGCGCAGCTCTGGGCCGCATTAAAGCGCTTTCTTCTCCAGCCATCACAGTAAAAGCCTttccttttgttttgtcttgttttgtgtgGTGTGTGTAGTGGCCCCCCCCCCGCCGCCCCTCGTCCCCTCAGGAGTGTAAAAAGGTCTCTTGTCATGTAAATGacctgttttgtgtgtgtggaaaGACATGATCTGTATCTGCAGCGGAGAGGAAATCAGGCCTCGGCATTGATCAGACTGAGCAGATCTGCCTTCTAACGCTCTAGATCGTACCAGTTGACATGCGAATTAGATTTAGGTGCAGATCTGGACTACCGCATAAAACATGAGATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036707 True 704 lncRNA 0.49 2 48502428 48517458

Neighbor

gene id symbol gene type direction distance location
XLOC_017678 NA coding upstream 2681 48496540 ~ 48499747 (+)
XLOC_017677 CABZ01059119.1 coding upstream 54588 48413712 ~ 48447840 (+)
XLOC_017676 tram2 coding upstream 362487 48116476 ~ 48139941 (+)
XLOC_017675 xkr5a coding upstream 397165 48100261 ~ 48105263 (+)
XLOC_017674 NA coding upstream 419031 48072385 ~ 48083397 (+)
XLOC_017680 LO018254.1 coding downstream 26034 48543492 ~ 48545232 (+)
XLOC_017681 NA coding downstream 50796 48568254 ~ 48569823 (+)
XLOC_017682 NA coding downstream 53002 48570460 ~ 48571101 (+)
XLOC_017683 NA coding downstream 53849 48571307 ~ 48583599 (+)
XLOC_017684 BX663521.6 coding downstream 92894 48610352 ~ 48610467 (+)
XLOC_017673 NA non-coding upstream 434340 48061746 ~ 48068088 (+)
XLOC_017672 NA non-coding upstream 467753 47988451 ~ 48034675 (+)
XLOC_017671 CU138532.1 non-coding upstream 520157 47982137 ~ 47982271 (+)
XLOC_017685 BX663521.2 non-coding downstream 93737 48611195 ~ 48611310 (+)

Expression


Co-expression Network