XLOC_017699


Basic Information

Item Value
gene id XLOC_017699
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 49306976 ~ 49307603 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036732
ACAGCCGTCCATATCCCAGCGTGCACTGTGCTTTTCCTGATGCACAGTGGCAGCGAGGACATGATTTACAGGGTACGGCATTACCACAAACCATCACCGACTGCATTCAGACTGTGTTCACTGCTGCTCTGTTCATTGGCCAGCAAATACTGAAGCAACTGTGGAAGTTATTAACCTGGTTTTTAGAGTGATTCAACATGAAAACATGATGTATTACACTAGTAAAGAGCCTTTTAGGGAGGCTTACGGTTACACAGCCATTTTTAACATGAAtgctatttgttattttattatgcaaatgTTTTATCTTATTATTAAATGTGCAAATTAAACATTAATGTAGCGCTTTTACACAATTTTTTCACAATGCCTGCACACAGAATTTTTCtaaattactttttaagtaaaagtaaaatgtaCTTGTTTCATTTTTAGTAGATTGTTGTCA

Function

GO:

id name namespace
GO:0006335 DNA replication-dependent nucleosome assembly biological_process
GO:0034723 DNA replication-dependent nucleosome organization biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036732 True 448 lncRNA 0.36 2 49306976 49307603

Neighbor

gene id symbol gene type direction distance location
XLOC_017697 cd109 coding upstream 131473 49119633 ~ 49175503 (+)
XLOC_017696 crnkl1 coding upstream 203659 49081967 ~ 49103317 (+)
XLOC_017695 LO017960.1 coding upstream 273858 49033004 ~ 49033118 (+)
XLOC_017694 NA coding upstream 279703 49003776 ~ 49027273 (+)
XLOC_017693 NA coding upstream 318862 48918454 ~ 48988114 (+)
XLOC_017700 NA coding downstream 143390 49450993 ~ 49459757 (+)
XLOC_017701 HMBOX1 coding downstream 479981 49787584 ~ 49804597 (+)
XLOC_017702 ints9 coding downstream 587617 49895220 ~ 49928430 (+)
XLOC_017703 riox1 coding downstream 707867 50015470 ~ 50044755 (+)
XLOC_017704 cpsf2 coding downstream 744513 50052116 ~ 50089898 (+)
XLOC_017692 BX005124.3 non-coding upstream 412975 48893342 ~ 48894001 (+)
XLOC_017691 BX005124.2 non-coding upstream 419443 48886477 ~ 48887533 (+)
XLOC_017706 NA non-coding downstream 902494 50210097 ~ 50298343 (+)
XLOC_017707 CU570682.1 non-coding downstream 940489 50248092 ~ 50249827 (+)
XLOC_017708 NA non-coding downstream 1021625 50329228 ~ 50332544 (+)
XLOC_017709 NA non-coding downstream 1143866 50451469 ~ 50504264 (+)

Expression


Co-expression Network