XLOC_017794



Basic Information


Item Value
gene id XLOC_017794
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 403316 ~ 405366 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036778
GTGTTTTACGACGAGGAAATGCGGAATCTAGTCATGAGAATGAAATGCGCCATCTAAAAGTGAAAGACGCGGCTGCTGGAGTCTACAGGAGGCAGGTTAGTCCTCCGTGATCTGCTTGGTCTCCTCTGGCTTTTTGGAAATGACTCTGACGTCGAAGGGGAAAAAGAAATCGGTCAGTGCTTTGGCGTCTTTGGGGTCTAAAGCGTACTCCTGCGCCAGCTTCTCTGCAGTCCAGGTTTCCGGCAGGTTCTTGTGATTGTTCAGGGCAGTGATGGCTTCTACCAGAGAGAGTTTTCCTTTGGGGACATCGCTGACGTCACAGAAACCGTAGGGCTCTCCCGGCAGACTGAGCTTCAGCTGTCGGCGCTGCGTCTCCTGCTCCAGCGTCTGAACTAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036778 True 396 lncRNA 0.53 2 403316 405366

Neighbor


gene id symbol gene type direction distance location
XLOC_017793 ccn6 coding downstream 118451 276753 ~ 284865 (-)
XLOC_017792 znf292b coding downstream 191396 196541 ~ 211920 (-)
XLOC_017791 smim8 coding downstream 214386 186277 ~ 188930 (-)
XLOC_017790 si:ch211-241j12.3 coding downstream 220475 159277 ~ 182841 (-)
XLOC_017789 rpf2 coding downstream 248327 150890 ~ 154989 (-)
XLOC_017795 NA coding upstream 3195 408561 ~ 411919 (-)
XLOC_017796 ufl1 coding upstream 13147 418513 ~ 438646 (-)
XLOC_017797 frk coding upstream 36576 441942 ~ 463786 (-)
XLOC_017798 col10a1b coding upstream 78890 484256 ~ 487783 (-)
XLOC_017799 NA coding upstream 125145 530511 ~ 534076 (-)
XLOC_017928 CU539064.1 misc upstream 9648039 10053405 ~ 10053701 (-)
XLOC_017787 NA non-coding downstream 286317 84692 ~ 116999 (-)
XLOC_017809 BX248418.2 non-coding upstream 792713 1198079 ~ 1198709 (-)
XLOC_017817 NA non-coding upstream 1339859 1745225 ~ 1763478 (-)
XLOC_017819 NA non-coding upstream 1653572 2058938 ~ 2090789 (-)

Expression



Co-expression Network