XLOC_017894



Basic Information


Item Value
gene id XLOC_017894
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 6478510 ~ 6480513 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036447
GACAGGACCAaacttccagcctgatctcacgagataacTTGCAGAATTGGGGATGTGTCGGCTTCTGCAGTGTGGACAGTGAGACCTATATTGAAAACACTGAGTCAGGCATCGCTGGCAGATTCTGGAAAGTACAGAGAAAAATGAATGCaagtaaaagaataaaaaataagcttTCATAACACAAAGACGTTCATGTGGTAACAAGAGTGGTTATCTTGGTCTACTCAACATGTGATGGAATTTCCCTTAAGAAATTGCTTTCGCTTTTAGTTGCCCGTAAGTGTTTCGATTGTTTATCAGAaatg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036447 True 308 lncRNA 0.40 2 6478510 6480513

Neighbor


gene id symbol gene type direction distance location
XLOC_017893 trappc8 coding downstream 1805 6308564 ~ 6476705 (-)
XLOC_017892 opn7a coding downstream 199693 6241855 ~ 6278817 (-)
XLOC_017891 NA coding downstream 263753 6212846 ~ 6214757 (-)
XLOC_017890 b4galt6 coding downstream 281521 6163932 ~ 6196989 (-)
XLOC_017889 pum2 coding downstream 346686 6089507 ~ 6131824 (-)
XLOC_017895 mcm3l coding upstream 36010 6516523 ~ 6532462 (-)
XLOC_017896 CT583652.1 coding upstream 101286 6581799 ~ 6583670 (-)
XLOC_017897 igfbp1a coding upstream 328261 6808774 ~ 6812688 (-)
XLOC_017898 adcy1a coding upstream 414373 6894886 ~ 7000225 (-)
XLOC_017899 sirt5 coding upstream 572357 7052870 ~ 7069612 (-)
XLOC_017928 CU539064.1 misc upstream 3572892 10053405 ~ 10053701 (-)
XLOC_017888 CABZ01062796.1 non-coding downstream 443440 6028201 ~ 6035070 (-)
XLOC_017887 CABZ01062797.1 non-coding downstream 455401 6012451 ~ 6023109 (-)
XLOC_017886 CABZ01064253.1 non-coding downstream 482807 5995589 ~ 5995703 (-)
XLOC_017885 BX088548.1 non-coding downstream 864514 5613879 ~ 5613996 (-)
XLOC_017902 NA non-coding upstream 657550 7138063 ~ 7139142 (-)
XLOC_017904 NA non-coding upstream 711370 7191883 ~ 7211196 (-)
XLOC_017907 NA non-coding upstream 1131642 7612155 ~ 7638652 (-)
XLOC_017909 NA non-coding upstream 1471269 7951782 ~ 7953182 (-)

Expression



Co-expression Network