XLOC_019120


Basic Information

Item Value
gene id XLOC_019120
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 40016148 ~ 40016368 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039198
gatgcagtcctccaagcttatgggagtcatacacaatattcattcaatcactgcaccatgactttatattcgatatactgtaaattatttctgttaagtaacaagacttttgtctaagcaaagtcagaccttactgtcctaattaaataattaaaaatgatggcATGATCATATTGTATTTTGGTAAAGTTACCTCTGGTGCCAAATGAACAataagaagt

Function

GO:

id name namespace
GO:0033218 amide binding molecular_function
GO:0042277 peptide binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039198 True 221 lncRNA 0.33 1 40016148 40016368

Neighbor

gene id symbol gene type direction distance location
XLOC_019119 slc47a1 coding upstream 39908 39941184 ~ 39976240 (+)
XLOC_019118 plrdgb coding upstream 118437 39705483 ~ 39897711 (+)
XLOC_019117 mrm3b coding upstream 330822 39673157 ~ 39685326 (+)
XLOC_019116 mntb coding upstream 502619 39461926 ~ 39513529 (+)
XLOC_019115 pafah1b1b coding upstream 561956 39423974 ~ 39454192 (+)
XLOC_019121 NA coding downstream 13984 40030352 ~ 40030572 (+)
XLOC_019122 NA coding downstream 26163 40042531 ~ 40042751 (+)
XLOC_019123 serpinf2a coding downstream 75933 40092301 ~ 40104916 (+)
XLOC_019124 serpinf1 coding downstream 90080 40106448 ~ 40120169 (+)
XLOC_019125 or115-15 coding downstream 179084 40195452 ~ 40197014 (+)
XLOC_019112 NA non-coding upstream 716125 39292120 ~ 39300023 (+)
XLOC_019108 NA non-coding upstream 994687 39005452 ~ 39021461 (+)
XLOC_019107 CU463284.1 non-coding upstream 1025445 38976592 ~ 38990703 (+)
XLOC_019106 CU463284.2 non-coding upstream 1043725 38960917 ~ 38972423 (+)
XLOC_019105 NA non-coding upstream 1088956 38873890 ~ 38927192 (+)
XLOC_019127 NA non-coding downstream 199005 40215373 ~ 40217558 (+)
XLOC_019143 NA non-coding downstream 383708 40400076 ~ 40401744 (+)
XLOC_019144 CR847523.2 non-coding downstream 384346 40400714 ~ 40400788 (+)

Expression


Co-expression Network